Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00598 ATGGTCCAGCGCCTCACATATCGTACGCGGCACAGCTATGCCACCAAGTCGAATCAGCACCGGATCGTCAAAACCCCTGGCGGAAAATTGGTTTATCAAACAACCAAGAAGAGGGCCAGTGGACCTAAATGCCCAGTCACTGGGAAGAGAATCCAAGGGATTCCTCACCTAAGACCTGCTGAATACAAGAGGTCAAGATTGTCCAGAAATCGAAGGACTGTGAATCGTGCCTATGGTGGTGTGTTATCGGGCAGTGCTGTTAGGGAGAGGATTATCCGTGCCTTTTTAGTCGAAGAGCAAAAGATCGTGAAAAAGGTTTTGAAGATTCAAAAGGCTAAGGAAAAGGTATCCTCAAAGAGCTAA 363 47.38 MVQRLTYRTRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKVSSKS 120
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13765751 13767083 + Bma009440.1 Bma13g00598 93327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00598 120 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bma13g00598 120 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bma13g00598 120 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bma13g00598 120 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bma13g00598 120 MobiDBLite consensus disorder prediction 31 50 - -
Bma13g00598 120 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Bma13g00598 120 PANTHER 60S RIBOSOMAL PROTEIN L34 1 120 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bma13g00598 120 Gene3D - 1 38 - -
Bma13g00598 120 PANTHER - 1 120 - -
Bma13g00598 120 Gene3D - 39 120 - -
Bma13g00598 120 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g00598 Bma14g01466 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00418 Bma-Chr2:6350501 Bma13g00598 Bma-Chr13:13765751 5.76E-80 transposed
Bma06g00174 Bma-Chr6:2205652 Bma13g00598 Bma-Chr13:13765751 1.30E-79 transposed
Bma13g00598 Bma-Chr13:13765751 Bma14g01427 Bma-Chr14:27227167 4.10E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00598 K02915 - sspl:121801607 212.231