Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00601 ATGGTTTCAGAAGAAGAGCTTTTGGTACAAAAAGTCTGCGAGCTGTACGACCAAATCTCAAGCCTCGAAAGCCTCAAACCAGGCAAAAATGTCGACACACTCTTCAACCAGCTGGTGCTGACTTGCATGCAGCCAAGCCCTCTTGACGTAGCCAAACTTTGCACGAGGGTTCAACAAATCAGAGCCAAGCTCATTAAACTATGTGCTGAGGCTGAGGGTCTTTTAGAGAACCATTTCTCGACCATCTTAGCCTCTTTTAAAAACCCACTTCAAAATCTCAGCCTTTTCCCTTACTATTCTAACTACCTCAAACTTAGCCTTCTCGAGTTCAACATTCTCACCCATTTTTGCCAAAACCCACCTGCCAAAATAGCTTTTATTGGGTCAGGTTCACTTCCTCTCACTTCCATTGTTTTAGCCTTAAACCACCTCCCCTACACCACTTTTCACAACTATGATATCGACCCAGTAGCCAACTCAAAGGCACTTTCTTTGATTTCATCTCATCCTGACCTGTCAAAAAGAATGTTTTTTCACACTGCAGATGTAATGAACGTCACTGCTGTTCTTAAAGAGTATCAATTAGTGTTTTTAGCTGCTTTAGTTGGAATGAATAAGGAGGAGAAAGTTGAAGTCATAGACCATTTGTGCAAGTATATGGCTCCTGGAGCTTATCTGATGGTTAGAAGTGCTCATGGAGCAAGGGCATTTATTTATCCAGTGGTTGATTTTTGTGATTTTCAAGGGTTTGAGATTCTGTCTGTTTTTCATCCAACTGATGAGGTTATAAATTCAGTCATTATTGCGAGGAAAGATGAGCAAGGGAAAAACTCCATTGGAATGCCTAATAAGTGCTCTGAGATGCAGATCTTCAATATTCCAAAAATGGAGGAATCAGCCATGGAAGAGCAGCTTTCCTAA 921 41.37 MVSEEELLVQKVCELYDQISSLESLKPGKNVDTLFNQLVLTCMQPSPLDVAKLCTRVQQIRAKLIKLCAEAEGLLENHFSTILASFKNPLQNLSLFPYYSNYLKLSLLEFNILTHFCQNPPAKIAFIGSGSLPLTSIVLALNHLPYTTFHNYDIDPVANSKALSLISSHPDLSKRMFFHTADVMNVTAVLKEYQLVFLAALVGMNKEEKVEVIDHLCKYMAPGAYLMVRSAHGARAFIYPVVDFCDFQGFEILSVFHPTDEVINSVIIARKDEQGKNSIGMPNKCSEMQIFNIPKMEESAMEEQLS 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14215672 14216592 - Bma009448.1 Bma13g00601 93330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00601 306 PANTHER NICOTIANAMINE SYNTHASE 3 1 303 IPR004298 GO:0030410|GO:0030418
Bma13g00601 306 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Bma13g00601 306 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 80 232 IPR029063 -
Bma13g00601 306 Gene3D Vaccinia Virus protein VP39 7 272 IPR029063 -
Bma13g00601 306 PANTHER SYNTHASE, PUTATIVE-RELATED 1 303 - -
Bma13g00601 306 Pfam Nicotianamine synthase protein 4 273 IPR004298 GO:0030410|GO:0030418
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g00601 Bma14g01298 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00617 Bma-Chr1:5587653 Bma13g00601 Bma-Chr13:14215672 1.39E-144 dispersed
Bma13g00601 Bma-Chr13:14215672 Bma14g01298 Bma-Chr14:23637875 1.49E-131 dispersed
Bma07g00704 Bma-Chr7:15795057 Bma13g00601 Bma-Chr13:14215672 1.20E-90 transposed
Bma15g00862 Bma-Chr15:22857385 Bma13g00601 Bma-Chr13:14215672 2.29E-93 transposed
Bma13g00601 Bma-Chr13:14215672 Bma14g01297 Bma-Chr14:23618880 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00601 K05953 - tcc:18600574 430.639