Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00618 ATGGGACATTTGTCTTCCATGTTAGATGGACTGGCAAGCTCGTTTTCGATGAAGAAGTGGCTAAACATGGACAATGTCGGGAGAAGAGAAGCTGCAGGAGCCATGGAGAAGGATTCAAAGAAAAAGGATTTAATTTTACGCACATCTAGTAGTGTAAACTTTGATGGTTCGACCAATTTTGCCTCCGTGTTTTCTAAGAAAGGCGAGAAAGGAGTAAATCAAGATTGTTGCATAGTTTGGGAGGAATTTGGACGTCGAGAGGACATGATCTTCTGCGGGATTTTCGATGGTCATGGGCCATGGGGCCATTTTGTTGCGAAAAATGCTCGAGAATCAATGCCATCATCCCTTTTGTGTAATTGGGAAGATGCTCTATCCCGATCGTCCTACACAGGAGACGTCGACTCTGACTATGAAAAAACCCACCAACGCTTCGAGCTATGGAAAAACTCTTACATAAAAACATGTGCGGCTATTGATCAGCAGCTCGAGCATCATCGGAAAATCGACTCGTTTTACAGTGGAACGACTGCCTTGTCAATTGTCAAACAGGGTGAGCTAATAGTCATGGCTAATGTGGGAGACTCTCGTGCCGTATTAGCCACATCGTTGGATGATGGAAGCCTAGTTCCCGTTCAACTTACTGTCGATTTCAAGCCAAATTTGCCTCAGGAGGCAGAGCGGATAGCTCAGTGCAACGGCCGAGTGTTTTGCTTAGACGACGAGCCTGGAGTTCACCGGGTGTGGCTACCGTATGAGCAATCACCTGGACTGGCCATGTCCCGAGCATTGGGTGATTACTGTGTCAAAGGCTTCGGACTCATTTCGGTTCCAGAAGTGACTCAGAGAACTATAACAAATGAAGATCACTTTGTTATCCTGGCAACTGATGGGGTTTGGGATGTTATTTCGAATCAAGAAGCCGTGCTGATTGTTTCGTCAGCACCAGAACGAGCAAAATCGGCCAAGCTTCTGGTGAAGGCAGCTGCTCGAGCATGGAGACGCAAGTGGCCGGGAATTGCCAGGGACGACATATCGGCCATATGTCTCTTCCTTCACCCTTCTCCTTAA 1071 47.15 MGHLSSMLDGLASSFSMKKWLNMDNVGRREAAGAMEKDSKKKDLILRTSSSVNFDGSTNFASVFSKKGEKGVNQDCCIVWEEFGRREDMIFCGIFDGHGPWGHFVAKNARESMPSSLLCNWEDALSRSSYTGDVDSDYEKTHQRFELWKNSYIKTCAAIDQQLEHHRKIDSFYSGTTALSIVKQGELIVMANVGDSRAVLATSLDDGSLVPVQLTVDFKPNLPQEAERIAQCNGRVFCLDDEPGVHRVWLPYEQSPGLAMSRALGDYCVKGFGLISVPEVTQRTITNEDHFVILATDGVWDVISNQEAVLIVSSAPERAKSAKLLVKAAARAWRRKWPGIARDDISAICLFLHPSP 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14686761 14688241 - Bma009470.1 Bma13g00618 93347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00618 356 CDD PP2Cc 59 352 IPR001932 -
Bma13g00618 356 Gene3D - 48 353 IPR036457 -
Bma13g00618 356 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Bma13g00618 356 Pfam Protein phosphatase 2C 84 323 IPR001932 -
Bma13g00618 356 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 356 - -
Bma13g00618 356 SUPERFAMILY PP2C-like 53 354 IPR036457 -
Bma13g00618 356 SMART PP2C_4 49 350 IPR001932 -
Bma13g00618 356 PANTHER ALPHABET, ISOFORM E-RELATED 1 356 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00618 Bma-Chr13:14686761 Bma14g01306 Bma-Chr14:23889374 0 dispersed
Bma13g00618 Bma-Chr13:14686761 Bma13g00621 Bma-Chr13:14771709 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00618 - - jre:109005271 527.324