Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00646 ATGGCTGCCGGTGCGGAAGTTAATGAGTTCATATTCCGGTCAAAACTCCCCGATATTCACATCCCGAACGATCTTCCTCTGCATGCTTTCTGCTTCGAGAAACTATCAGAGGTTGGCTCTCGGCCGTGTCTGATCAATGGCTCTACCGGAGATATATTCACGTACGATGATGTTCGGCTAATGGCGAGAAAAGTGTCGGTGGGGCTTAAAAGCCTCGGCATCGGAAAAGGCGACGTTATCATGCTTTTGCTTCCCAACTGCCCGGAGTTTGTGTTTTCCTTCCTTGGCGCTTCGTACGGTGGAGCTATAATGACCGCTGCAAATCCGTTTTTCACTGCAGCGGAGATTGCCAAGCAAGCTAAAGCTTCAAAAGCAAAGGTCATTATAACCCAAGCTTGCTACTACGAGAAAGTGAAAGACCTAGCCGGAGTAAATATCATCTGCACAGACGCACCTCCGGAAGGGTGTTTGCATTTCTCCGAGCTCACTAAGTCCGACGGGGAAAACACTCCGGTGGTGGAAATATGCCCAGACGACGTCGTAGCCCTTCCGTATTCATCTGGAACTACTGGATTGCCCAAAGGTGTGATGTTGACCCATAAAGGGCTAGTGACGAGCGTAAGTCAGCAGGTCGACGGAGACAATCCGAACCTGTACTACGGAAGAGACCACGTCGTTCTCTGTGTTTTACCTCTCTTCCACATATATTCTCTCAACTCCGTTTTGCTCTGCGCGTTGAGATCGGGGGCTGCGATCTTGATAATGCAGAAGTTTGAGATCAAATCCCTGCTGAATTTGATTCAGAAGTATAAGGTTTCGGTGGCACCAATCGTGCCGCCGATTGTTTTGGCAATAGCAAAGTCGCCGGAGCTCGAGAACTACGATCTTTCGTCGATAAGGGTGCTGAAATCAGGCGGCGCCCCGCTGGGGAAGGAGCTTGAGGATACGGTGAGAGCCAAATTTCCGAAAGCGGTGCTTGGTCAGGGTTACGGAATGACAGAGGCAGGTCCAGTTCTAACAATGAGCCTAGCCTTCGCGAAGTACGTGGTATTCTACAAGAGACTGAACAGAGTATTCTTCATTGACGCGATTCCAAAGGCGCCCTCTGGCAAGATCTTGAGGAAAAACTTGAAAGCTATTTTAGATAATGGCCTACCCAATTAG 1164 49.4 MAAGAEVNEFIFRSKLPDIHIPNDLPLHAFCFEKLSEVGSRPCLINGSTGDIFTYDDVRLMARKVSVGLKSLGIGKGDVIMLLLPNCPEFVFSFLGASYGGAIMTAANPFFTAAEIAKQAKASKAKVIITQACYYEKVKDLAGVNIICTDAPPEGCLHFSELTKSDGENTPVVEICPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVSQQVDGDNPNLYYGRDHVVLCVLPLFHIYSLNSVLLCALRSGAAILIMQKFEIKSLLNLIQKYKVSVAPIVPPIVLAIAKSPELENYDLSSIRVLKSGGAPLGKELEDTVRAKFPKAVLGQGYGMTEAGPVLTMSLAFAKYVVFYKRLNRVFFIDAIPKAPSGKILRKNLKAILDNGLPN 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15816539 15819405 - Bma009514.1 Bma13g00646 93375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00646 387 Pfam AMP-binding enzyme 40 341 IPR000873 -
Bma13g00646 387 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 347 381 - -
Bma13g00646 387 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 347 - -
Bma13g00646 387 ProSitePatterns Putative AMP-binding domain signature. 183 194 IPR020845 -
Bma13g00646 387 Gene3D - 5 357 IPR042099 -
Bma13g00646 387 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 347 381 - -
Bma13g00646 387 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 347 - -
Bma13g00646 387 SUPERFAMILY Acetyl-CoA synthetase-like 7 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00646 Bma-Chr13:15816539 Bma15g00435 Bma-Chr15:4732976 6.43E-13 dispersed
Bma13g00643 Bma-Chr13:15570133 Bma13g00646 Bma-Chr13:15816539 4.00E-17 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00646 K01904 - jre:108986343 526.554