Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00656 ATGAGAATCAACGTGAAGAAATCGACAATGGTGAGCCCATCAGCAGAAACGCCCCAGAAAACCCTGTGGAACTCAAATGTAGACCTTGTGGTGCCAAGCATGCACACCCCAAGCGTCTACTTCTACAGGCCTACCGGAGCCTCCAACTTCTTTGATGCGCAGGTCCTGAAGGAGGCCCTTAGCAAGGCCTTGGTCCCCTTCTACCCCATGGCCGGGCGGCTGAAGAGGGACGAAGATGGTCGAATCGAGATCGACTGCAGAGGGCAGGGCGTGCTCTTTGTTGAGGCTGATACTGGCTCGGTCGTTAATGATTTTGGCGACTTTGCTCCCACTTTAAAGCTTCGTCAGCTCATTCCAACTGTTGATTATTCTGGTGGAATAGAGTCTTATCCTCTTCTGGTCTTGCAGGTCACTCACTTCAAGTGTGGAGGAGTTTCACTTGGTGTTGGTATGCAACATCATGTTGCTGACGGGTTTTCCGGCCTCCACTTTGTGAACACATGGTCTGATATGGCTCGTGGTCTTGACCTTTCGATTCCGCCTTTTATCGACCGGAGTCTACTCGAGGCTCAGGACCCACCGAGCCCTGCATTTCAACATGTTGAATACCAACCCCCTCCTTCGATGAAAACACCCTTGCCTGCTGGAGAATTAGGCTCCGATGCAGTTGCTGTTTCGATTTTCAAAATGTCCCGCGATCAGCTCAACAAACTGAAGGCAAAATCGAAAGAAAATGGTAACAAGACCAACTATAGTTCGTATGAGATGTTATCGGGCCATGTGTGGAGAAGTGTTTGCCTCTCGCGCGGACTTCCGGACGACCAGGAAACAAAGCTGTACATTGCGACAGATGGGCGGTTCAGATTGCGGCCTCATCTTCCTCCGGGGTACTTTGGCAATGTGATATTCACTGCTACACCAATTGCAATAGCTGGTGATCTCCAATCGAAGCCAACGTGGTATGCTGCAAGTCGGATCCATGACACCTTGGTGAAAATGGACAATGATTATTTAAGATCAGCCCTTGATTATCTCGAGCTGCAACCGGATTTGTCAGCTCTCGTGCGCGGAGCCCACACGTTTAGGTGTCCTAATCTGGGAATCACCAGTTGGGTCAGGCTGCCAATCCACGATGCTGATTTCGGGTGGGGTCGGCCTATTTTCATGGGGCCCGGCGGAATTGCGTACGAAGGTCTGGCGTTTATGATACCGAGTTCTACAGACGACGGGAGTTTATCAGTGGCGATCGCATTGCAATCTCAACACATGAAAGTGTTTGAAAAAGTGTTGTATGAAATTTGA 1302 50.08 MRINVKKSTMVSPSAETPQKTLWNSNVDLVVPSMHTPSVYFYRPTGASNFFDAQVLKEALSKALVPFYPMAGRLKRDEDGRIEIDCRGQGVLFVEADTGSVVNDFGDFAPTLKLRQLIPTVDYSGGIESYPLLVLQVTHFKCGGVSLGVGMQHHVADGFSGLHFVNTWSDMARGLDLSIPPFIDRSLLEAQDPPSPAFQHVEYQPPPSMKTPLPAGELGSDAVAVSIFKMSRDQLNKLKAKSKENGNKTNYSSYEMLSGHVWRSVCLSRGLPDDQETKLYIATDGRFRLRPHLPPGYFGNVIFTATPIAIAGDLQSKPTWYAASRIHDTLVKMDNDYLRSALDYLELQPDLSALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLAFMIPSSTDDGSLSVAIALQSQHMKVFEKVLYEI 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16170772 16172802 - Bma009530.1 Bma13g00656 93385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00656 433 Pfam Transferase family 2 430 - -
Bma13g00656 433 Gene3D - 217 433 IPR023213 -
Bma13g00656 433 Gene3D - 1 205 IPR023213 -
Bma13g00656 433 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 432 - -
Bma13g00656 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 432 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00705 Bma13g00656 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01163 Bma-Chr4:30046488 Bma13g00656 Bma-Chr13:16170772 4.88E-15 dispersed
Bma08g00888 Bma-Chr8:47527377 Bma13g00656 Bma-Chr13:16170772 3.48E-82 dispersed
Bma14g02077 Bma-Chr14:44132969 Bma13g00656 Bma-Chr13:16170772 7.70E-43 dispersed
Bma01g00721 Bma-Chr1:6593427 Bma13g00656 Bma-Chr13:16170772 3.46E-56 transposed
Bma05g00897 Bma-Chr5:46820921 Bma13g00656 Bma-Chr13:16170772 8.74E-27 transposed
Bma13g00595 Bma-Chr13:13656815 Bma13g00656 Bma-Chr13:16170772 8.75E-11 transposed
Bma14g01152 Bma-Chr14:16400252 Bma13g00656 Bma-Chr13:16170772 6.13E-56 transposed
Bma15g00283 Bma-Chr15:2784539 Bma13g00656 Bma-Chr13:16170772 9.37E-34 transposed
Bma10g00843 Bma-Chr10:15026357 Bma13g00656 Bma-Chr13:16170772 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00656 K13065 - pop:7478310 750.74