Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00660 ATGGCGGATCTCAAAGAACGATTGCTTCCTCCTAGACCTGCATCTGCCATTAACCTTAGGGAGTCATCTCATCGTCCATCAGCCAGTGGAAGGCAGCCTTTTCAAGGCGTGGATGTTCCGGGATTGAAGAAACGAGGCCCAGGGCTTAGATCTTGGATTCGGGTTGACCTTGCTGGGAACTCTCAAATCATTGAGGTTGATAAGTTCACCATGATGCGACGTTGTGATCTTCCTGCTCGTGATCTTCGTCTGCTTGATCCTCTTTTCGTTTATCCATCTACAATACTTGGTAGAGAGAAGGCTATTGTCGTTAATTTGGAGCAAATTCGATGCATTATCACTGCAGATGAGGTTCTGTTATTGAATTCACTTGATAGTTATGTTCTGCAATATGTAGTAGAACTCCAACGCCGACTAACAGGTAATGGGACTGGGGAGGTTTGGCAATCTCAAAGTCTAGACTTGAACTGGAGGAGTGGAAATAGACACTTGCAGAATGCGTTTGGTAGCACATCACCTGATTATTTACCCTTTGAGTTTAGGGCTCTAGAAGTTGCTCTTGAAGCTGCTTGTACGTTTCTCGATTCTCAGGCAGCAGAATTAGAAATAGAAGCATATCCACTGTTAGATGAACTCACATCAAAGATCAGTACATTAAATCTGGAACGTGCACGACGACTGAAAAGCAGACTCGTTGCCTTGACTCGCAGAGTTCAGAAGGTTAGGGATGAAATAGAGCAACTCATGGATGATGATGGTGACATGGCTGAAATGTATCTCACAGAGAAGAAAAGGCGGATGGAGACTTCCTTTTATGGCGATCAGTCTTTGATGACATACAGATCAAACGAAGGAGCCTCAGCCTCTGCTCCGGTTTCACCTGTATCCTCCCCTCCTGAAGCACGAAAGCTCGAGAAAAGCTTGAGTATTGCCAGAAGTCGACATGAGAGCATGAGGAGTTCAGAAAGCGCTGCCGACAGTATAGAAGAGCTCGAGATGTTGCTTGAAGCATATTTTGTCGTCATTGATAGCACCTTAAATAAGTTGACATCATTGAAAGAGTACATCGACGACACAGAAGATTTCATCAACATTCATTTGGATAACGTGAGAAATCAGCTGATCCAATTTGAGCTACTACTCACAACAGCAACATTCGTGGTTGCAATCTTCGGGGTGGTTGCCGGGATCTTTGGTATGAACTTTTCAATACCACTTTTCGACGATGAAGGCGCGTTTAAGTGGGTTCTTGTAATCACAGGAGTAAGTGGTGTATGCATTTTTCTTGGATTCCTTTGGTTTTTCAAATATAGAAGACTCATGCCATTGTAG 1332 43.92 MADLKERLLPPRPASAINLRESSHRPSASGRQPFQGVDVPGLKKRGPGLRSWIRVDLAGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLQYVVELQRRLTGNGTGEVWQSQSLDLNWRSGNRHLQNAFGSTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERARRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMETSFYGDQSLMTYRSNEGASASAPVSPVSSPPEARKLEKSLSIARSRHESMRSSESAADSIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIHLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFSIPLFDDEGAFKWVLVITGVSGVCIFLGFLWFFKYRRLMPL 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16386481 16389000 + Bma009536.1 Bma13g00660 93389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00660 443 Gene3D Magnesium transport protein CorA, transmembrane region 156 374 - -
Bma13g00660 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Bma13g00660 443 MobiDBLite consensus disorder prediction 305 322 - -
Bma13g00660 443 Pfam CorA-like Mg2+ transporter protein 342 429 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bma13g00660 443 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 443 - -
Bma13g00660 443 MobiDBLite consensus disorder prediction 1 42 - -
Bma13g00660 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 433 IPR045863 -
Bma13g00660 443 CDD Mrs2_Mfm1p-like 52 440 IPR039204 -
Bma13g00660 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 443 IPR039204 -
Bma13g00660 443 MobiDBLite consensus disorder prediction 283 322 - -
Bma13g00660 443 Coils Coil 224 251 - -
Bma13g00660 443 Gene3D - 42 123 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00007 Bma-Chr12:267972 Bma13g00660 Bma-Chr13:16386481 4.50E-115 dispersed
Bma12g00295 Bma-Chr12:4172559 Bma13g00660 Bma-Chr13:16386481 7.22E-59 dispersed
Bma06g00739 Bma-Chr6:38397233 Bma13g00660 Bma-Chr13:16386481 9.81E-155 transposed
Bma07g01468 Bma-Chr7:50336108 Bma13g00660 Bma-Chr13:16386481 6.75E-21 transposed
Bma12g00023 Bma-Chr12:735368 Bma13g00660 Bma-Chr13:16386481 2.11E-97 transposed
Bma10g00852 Bma-Chr10:15344481 Bma13g00660 Bma-Chr13:16386481 2.94E-34 wgd
Bma10g00852 Bma-Chr10:15344481 Bma13g00660 Bma-Chr13:16386481 2.94E-34 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00660 K16075 - zju:107406935 749.584