Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00668 ATGTTGGAAAATTACAATGCATTGAGAAGCTATTTGATGGATTGTATCAACAAAAACTCAGACAAGGAACTCAGCCCGGCGAAGAAAAGAAAATTAGAAGGCAGTAACAACAACATCAGCAATACCCTCGGAACCGACGCAAATTCCGACACAAGCTCCTGCGAGGAGGAGTCGTGCAAGAAACCAAGAGAAGAAACGATCAAATCCAAAATTACGAAAACTTATTACAAGACCGAACCATCTGATACAAGCCTCGTTGTGAAAGATGGGTATCAATGGAGGAAATATGGGCAAAAAGTGACCAGGGATAATCCTTGTCCTAGAGCTTATTTTAGATGCTCTTTCGCTCCTACATGTCCCGTCAAAAAGAAGGTGCAAAGAAGTGTGGAAGATCAGTCTGTTTTGGTTGCAACTTACGAAGGAGAACACAACCATCCAAACTCCGGCCAGGAGGTGAACTCAGCCTCAACTCGACGAGTTACTATTGGGTCGGTCCCTCTTTCGAGTTCTCAGTCCTCCATCAATCCAGATTTCATGAAATCAAAGACCATTAGCGAAGCGGAAGCTTTGAAATCGACAACTGACGTGCCTGTAATACAGCAGTATCTGGTGGAGCAGATGGCTTCTTCTCTGACGAAAGATCCTAAATTCACAGCAGCTTTGGCTGCAGCCATATCTGGAAGAATGTTTTCAGGGTAG 699 44.06 MLENYNALRSYLMDCINKNSDKELSPAKKRKLEGSNNNISNTLGTDANSDTSSCEEESCKKPREETIKSKITKTYYKTEPSDTSLVVKDGYQWRKYGQKVTRDNPCPRAYFRCSFAPTCPVKKKVQRSVEDQSVLVATYEGEHNHPNSGQEVNSASTRRVTIGSVPLSSSQSSINPDFMKSKTISEAEALKSTTDVPVIQQYLVEQMASSLTKDPKFTAALAAAISGRMFSG 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16791555 16792502 - Bma009548.1 Bma13g00668 93397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00668 232 MobiDBLite consensus disorder prediction 26 58 - -
Bma13g00668 232 PANTHER WRKY TRANSCRIPTION FACTOR 40-RELATED 1 231 - -
Bma13g00668 232 Pfam WRKY DNA -binding domain 88 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma13g00668 232 SMART WRKY_cls 87 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma13g00668 232 ProSiteProfiles WRKY domain profile. 82 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma13g00668 232 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 231 IPR044810 GO:0003700
Bma13g00668 232 SUPERFAMILY WRKY DNA-binding domain 84 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma13g00668 232 MobiDBLite consensus disorder prediction 31 52 - -
Bma13g00668 232 Gene3D WRKY domain 71 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02170 Bma-Chr1:78641600 Bma13g00668 Bma-Chr13:16791555 3.52E-48 dispersed
Bma04g00090 Bma-Chr4:740743 Bma13g00668 Bma-Chr13:16791555 1.55E-53 dispersed
Bma10g00854 Bma-Chr10:15358132 Bma13g00668 Bma-Chr13:16791555 1.72E-124 wgd
Bma10g00846 Bma-Chr10:15059408 Bma13g00668 Bma-Chr13:16791555 1.10E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58230 PF03106 WRKY 1.80E-23 CL0274 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00668 - - rcu:8279744 302.753