Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00671 ATGCCAACCCACAGCTCATCATTTGCCGGAAAAACAGTTTGCGTCACCGGTGCAGGAGGGTTCATTGCGTCTTGGATCGTGAAGCTTCTCCTCGAAAGAGGTTATATTGTTCGGGGAACTGTCAGAAATCCAGATGATCCTAAGAACGCACATCTAAAAGAACTTGAAGGAGCCAAGGACAGGTTAACTTTGCACAAAGCTGATCTTCTCGATTACGAGAGCCTTAGAAATGCTATCGCAGGTTGTGACGGTGTTTTCCATACGGCCTCGCCGATGACGGACGATGAACAAATGCTTGGACCTGCTATTAATGGTGCCAAATATGTGATCGTCGCAGCTGCCGAAACAAACGTGCAGCGTGTAGTGTTCACATCATCGATTGGTGCAGTGTACATGGACCCTAATCGGAGCTCCGACGTGGTCGTCGATGAAACTTTCTGGAGTGATCTCGAGTTTTGCCAAAACACCAAGAATTGGTATTGTTATGGGAAAACAGTGGCAGAAAAAGCAGCATGGGAAGAAGCAAAGAAGAGAGGGGTAGATCTACTGGTAATAAATCCAGTGCTAGTAATTGGACCGTTGCTTCAATCCACCATTAATGCAAGCACAATTCATATTCTCAAGTACTTGACTGGCTCAGCCAAGACATTTGCTAATTCCATTCAAGGGTATGTTCATGTCAAAGATGCAGCTTTGGCCCACATTATCGTCTTCGAGACTCCGTCAGCCTTGGGCCGTTACCTTTGTGCCGAAAGCATACTTCACCGAGAGGAGGTGGTCGGAATCCTAGCCAAGCTCTTTCCGGAATATCCCATCCCTCTTAAGTGCTCGGACGAGGTGAACCCGAGGAAGAAGCCATACAAGTTCTCCAATCAAAAGCTTAAAGATTTAGGTCTGGAGTTCACACCAGCAAAACATTGCCTATATGACGCAGTCAAGAGCTTACAAGAGAAGGGACATCTTCCTCTTCCTTGA 975 46.67 MPTHSSSFAGKTVCVTGAGGFIASWIVKLLLERGYIVRGTVRNPDDPKNAHLKELEGAKDRLTLHKADLLDYESLRNAIAGCDGVFHTASPMTDDEQMLGPAINGAKYVIVAAAETNVQRVVFTSSIGAVYMDPNRSSDVVVDETFWSDLEFCQNTKNWYCYGKTVAEKAAWEEAKKRGVDLLVINPVLVIGPLLQSTINASTIHILKYLTGSAKTFANSIQGYVHVKDAALAHIIVFETPSALGRYLCAESILHREEVVGILAKLFPEYPIPLKCSDEVNPRKKPYKFSNQKLKDLGLEFTPAKHCLYDAVKSLQEKGHLPLP 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17026197 17028020 - Bma009553.1 Bma13g00671 93400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00671 324 Pfam NAD dependent epimerase/dehydratase family 13 243 IPR001509 -
Bma13g00671 324 PANTHER CINNAMOYL-COA REDUCTASE 9 322 - -
Bma13g00671 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 316 IPR036291 -
Bma13g00671 324 CDD FR_SDR_e 13 299 - -
Bma13g00671 324 Gene3D - 3 324 - -
Bma13g00671 324 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00270 Bma-Chr7:3285028 Bma13g00671 Bma-Chr13:17026197 6.03E-56 dispersed
Bma12g00041 Bma-Chr12:961488 Bma13g00671 Bma-Chr13:17026197 6.12E-74 dispersed
Bma13g00671 Bma-Chr13:17026197 Bma14g01708 Bma-Chr14:36201608 1.04E-71 dispersed
Bma13g00671 Bma-Chr13:17026197 Bma14g00556 Bma-Chr14:5985010 5.25E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00671 K09753 - tcc:18595421 533.102