Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00698 ATGGTGAACCACTTCGTTCAGGAATTCGAGAGGAAGAACAAGAAAGACATCAGTGGCAATCCTCGGGCTCTTAGGAGACTGAGGACCTCGTGTGAGAGGGCAACGAGAACTCTCTCATCCACTGCTCGGACCACCATAGAAATGGATTCCTTGTACGAAGGCATTGATTTTTACTCGACCATCACGAGAGCTAGACTTGAGGAGATGAACGTGGATCTCTTCAGAAAGTGTATGGAACCAGTAGCAAAAGGTCTGAGAGATGCTAAGATGGACAAGAGCTCCGTCCACGACGTGGTACTGGTTGGTGGGTCTACCAGAATACCTAAGGTCCAGCAGCTCTTGCAGGATTTCTTCAATAGCAAAGAGTTTTGCAAGAGCATTAACCCTGCTGAGGCTATTGCCTATGGGGCTGCTGTTCAGGCTGCTATCTTGAGTGGAGAGGGCAATGAAAAGGTACAAGATCTCTTGCTTTTGGATGTCACTCCTCTCTCACTTGGATTGGAAACCGCTGGTGGTGTCACGACTGTATTGATACCCAGAAACACTACAATTCCCACAAAGAAGGAGCAGGTCTTCTCTACCTACTCCGACAACCAGCCCGGAGTTTTGATCCAGGTGTATGAAGGTGAAAGAACAAGAACCCGTGATAATAACTTGCTCGGAAAGTTTGAACTCTCTGGCATTCCTCCGACTCCCAGAGGAGTTTCCCAGATCTCTGTTTTTTTCGACAAGGGCAGGATCTCAACGAGGAGAGTTGGACTTGATCGCCTTTCACTAGTTACCCAAATGACAAAACATTTTCGTGTTAGAGCCTCTGGAGGACGAAGTTCAGTGAATGAACTTGAGCAATTCTCCCCAATATTTGTTGGGCTTGTGCGGGACTTTTATTTAGATTTAGCTGAGGATAAAAGAATGATCACCCAACAGAGAGTGGAAGAAACTTTTAAGGATACGGCTGTTCCGTCGTTGTAA 972 46.6 MVNHFVQEFERKNKKDISGNPRALRRLRTSCERATRTLSSTARTTIEMDSLYEGIDFYSTITRARLEEMNVDLFRKCMEPVAKGLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNSKEFCKSINPAEAIAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVTTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPTPRGVSQISVFFDKGRISTRRVGLDRLSLVTQMTKHFRVRASGGRSSVNELEQFSPIFVGLVRDFYLDLAEDKRMITQQRVEETFKDTAVPSL 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 19664215 19665186 - Bma009605.1 Bma13g00698 93427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00698 323 PRINTS 70kDa heat shock protein signature 95 111 - -
Bma13g00698 323 PRINTS 70kDa heat shock protein signature 127 147 - -
Bma13g00698 323 PRINTS 70kDa heat shock protein signature 154 173 - -
Bma13g00698 323 Pfam Guanylate-binding protein, N-terminal domain 253 312 IPR015894 GO:0003924|GO:0005525
Bma13g00698 323 Gene3D Actin; Chain A, domain 4 1 76 - -
Bma13g00698 323 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 247 - -
Bma13g00698 323 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 142 282 IPR029047 -
Bma13g00698 323 Pfam Hsp70 protein 1 243 IPR013126 GO:0005524|GO:0140662
Bma13g00698 323 SUPERFAMILY Actin-like ATPase domain 1 146 IPR043129 -
Bma13g00698 323 PANTHER HEAT SHOCK PROTEIN 70KDA 1 247 IPR013126 GO:0005524|GO:0140662
Bma13g00698 323 Gene3D - 77 124 - -
Bma13g00698 323 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 150 243 IPR029047 -
Bma13g00698 323 ProSitePatterns Heat shock hsp70 proteins family signature 3. 98 112 IPR018181 -
Bma13g00698 323 Gene3D - 125 141 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00506 Bma-Chr13:9709869 Bma13g00698 Bma-Chr13:19664215 0 dispersed
Bma13g00698 Bma-Chr13:19664215 Bma10g00293 Bma-Chr10:2671676 2.02E-163 dispersed
Bma13g00698 Bma-Chr13:19664215 Bma01g01879 Bma-Chr1:69104163 1.03E-163 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00698 K03283 - pvy:116141684 430.639