Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00745 ATGGCTTGCAGCGCTGCCGACCTTCACTCCCTCCTCGGCGGCACAGCCAATGCCACCTCTGCTGCCGCCTACATCTGCTCACAATTCGATGCCGTTTCCAGCAAGTTTATCGACACAAACTATGCCATCGATAACACCTATCTTCTCTTCTCTGCCTACCTGGTTTTTGCCATGCAGCTCGGCTTTGCCATGCTCTGTGCCGGCTCGGTTCGAGCGAAGAACACGATGAACATCATGCTGACCAACGTTCTCGACGCTGCAACTGGTGGTCTCTTCTATTATCTCTTTGGATTTGCGTTGGCTTTTGGCACTCCTTCTAATGGGTTCACGGGGCAGCACTTTTTTGGGCTAAGTAAATTTCCTTCTCCATCGTTTGACTATGGCTTCTTTCTGTATCAGTGGGCTTTCGCCATTGCAGCTGCTGGAATAACCAGCGGTTCGATTGCAGAGAGAACACAGTTTGTTTCTTATTTGATCTATTCTTCTTTCTTGACCGGTTTGGTTTACCCTATTGTTTCCCACTGGTTCTGGTCTGCTGATGGCTGGGGAAGCCCTGCTAGAGCTGATGGTCTCTTGTTTGACTCTGGGGTTATTGACTTTGCTGGCTCCGGTGTTGTTCACTTGGTCGGTGGAATTGCTGGCTTGTGGGGAGCCTTCATTGAGGGGCCGAGAATTGGCCGATTCGACCATGGAGGCAAGGCCGTGGCTCTACGCGGCCACAGCGGCACACTCGTCATTCTTGGCACGTTCCTTCTCTGGTTCGGTTGGTATGGTTTCAACCCAGGCTCGTTCCTCAACATAGCCAAGGCTTATGGAGAAAGTGGATCGTATTACGGGCAGTGGAGTGCAATAGGAAGAACTGCAGTGACGACAACCCTCGCTGGCTGCTCTGCCGCCCTGACAACCCTTTTCGGAAAACGATTGCTCTCAGGCCATTGGAACGGAACTGACGTGTGCAACGGCTTGCTCGGTGGGTTTGCAGCCATTACCGGTGGGTGCTCCGTGGTTGACCCGTGGGCTGCAGTTCTGTGTGGGTTCGTGGCAGCCTGGGTCCTTATAGGCTTCAACAAGCTAGCTGAGAAGCTCAAGTACGACGACCCGCTAGAAGCGGCTCAGCTCCACGGAGGGTGCGGCATGTGGGGAATAATCTTCACCGGATTGTTTGCTAAAAAAGCTTATGTCAACGAAATATATCCAGGGCAGCCAGACAGACCTTATGGGCTGCTCATGGGCGGTGGAGGAAAGCTATTGGCTGCACACATTGTTCAGATACTGGCCATTCTAGGCTGGGTGAGCATAACAATGGGGACTCTCTTCTGGATCCTGCAAAAACTGAAGCTTTTGAGAATTACTGCTGAAGAGGAAATGGCAGGAATGGATTTGACCAGCCATGGAGGGTTTGCATATGAATACAAGGACGAGAACAAATCCGAGCTCATCATACAGGGGGATCCTTGA 1458 51.85 MACSAADLHSLLGGTANATSAAAYICSQFDAVSSKFIDTNYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGLFYYLFGFALAFGTPSNGFTGQHFFGLSKFPSPSFDYGFFLYQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVSHWFWSADGWGSPARADGLLFDSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDHGGKAVALRGHSGTLVILGTFLLWFGWYGFNPGSFLNIAKAYGESGSYYGQWSAIGRTAVTTTLAGCSAALTTLFGKRLLSGHWNGTDVCNGLLGGFAAITGGCSVVDPWAAVLCGFVAAWVLIGFNKLAEKLKYDDPLEAAQLHGGCGMWGIIFTGLFAKKAYVNEIYPGQPDRPYGLLMGGGGKLLAAHIVQILAILGWVSITMGTLFWILQKLKLLRITAEEEMAGMDLTSHGGFAYEYKDENKSELIIQGDP 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 23403753 23405210 - Bma009676.1 Bma13g00745 93474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00745 485 PANTHER AMMONIUM TRANSPORTER 1 477 - -
Bma13g00745 485 ProSitePatterns Ammonium transporters signature. 199 224 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bma13g00745 485 Gene3D Ammonium transporter AmtB like domains 21 483 IPR029020 -
Bma13g00745 485 SUPERFAMILY Ammonium transporter 42 450 - -
Bma13g00745 485 Pfam Ammonium Transporter Family 47 469 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bma13g00745 485 TIGRFAM amt: ammonium transporter 44 469 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bma13g00745 485 PANTHER AMMONIUM TRANSPORTER 1 477 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00745 Bma-Chr13:23403753 Bma14g01220 Bma-Chr14:18758158 0 dispersed
Bma10g00389 Bma-Chr10:3828980 Bma13g00745 Bma-Chr13:23403753 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00745 K03320 - jre:109020544 851.277