Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00787 ATGTATGGAAGAAAGGCATTTCAGCTGGTGAAGGAGCTTTCAACTAGCGAGAAGGGGCAGTTGAAGCTCTTCAATAGTGATCTTTTTGACCAAGTGATCGCAGAATGTAATCAACATCACCTTGAGCTTCAGTCCTTGATAAGGAAAATGCAGGAAGAAGGAATGGATCTTCAGACAACTAAAAACGCAGACCACTTTGGGGCACTCATTCACCACCTTGCTTTAGTCCGGAATAAACGCTGTTTGATGGCATATGCCTACAATCGAGCTGAATTCACCCGGAGTTTGATGTGGAAGGTAGGAACCGTGCTTCCACAAGAAATTGAAGTAAAGCTCAGCCACTCGGAGGAGGAGTATTTTAAGAAACACTCTGCAGCTCTGAAATCATTTATGTCAAAACTGGAACTTGATTTAACTGTGGATATGGTGCCACCCAAAGATCCTTATATCCAGGTTAGAGTTCTCGATGATATTGGAGAAGGAATTGTCCTCAGTGATGATAAGACAGCAAATTTTGCTCGACATTCAATGCACTTTCTTAAACGAACCGATGCCGAGCAGTTCATTTCTCGAGTAAGATAG 582 42.61 MYGRKAFQLVKELSTSEKGQLKLFNSDLFDQVIAECNQHHLELQSLIRKMQEEGMDLQTTKNADHFGALIHHLALVRNKRCLMAYAYNRAEFTRSLMWKVGTVLPQEIEVKLSHSEEEYFKKHSAALKSFMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSMHFLKRTDAEQFISRVR 193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 28434463 28436788 + Bma009758.1 Bma13g00787 93516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00787 193 PANTHER PARTNER OF SLD5 1 192 IPR005339 GO:0000811|GO:0006260
Bma13g00787 193 Pfam GINS complex protein 26 116 IPR021151 -
Bma13g00787 193 Gene3D - 1 134 - -
Bma13g00787 193 Coils Coil 33 53 - -
Bma13g00787 193 CDD GINS_A_psf1 3 136 IPR005339 GO:0000811|GO:0006260
Bma13g00787 193 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00787 Bma-Chr13:28434463 Bma14g00698 Bma-Chr14:7592368 1.25E-143 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00787 K10732 - csv:101205409 325.865