Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00879 ATGGAAGCACTAAGATCAGGAACGATAGAAACAAGGACCAATTCGGCTGCAACCCTTTTCACTTTATCAGCGCTTGATTCAAACAAGGCCCTGATAGGGAAAGCAGGAGCATTAAAACCTCTCATAGATCTCTTGGAAGAGGGGCATCCTTTAGCCATGAAAGACGTAGCTTCTGCAATCTTTAATCTCTGTATAATCCATGAGAACAAGGCAAGAGCAGTCCGAGACGGGGCTGTCAGAGTGATTTTGAGGAAGCTGATGAAAAATGTCCATGTTGATGAGTTATTAGCCATTCTTGCAATGCTTTCAAGCAATCAGAAGGCCGTTGAGGATATGGGGGAGGTCGAAGCCGTTCTTTGCTTGCTCGGCATAATCCGGGACAATCCTTGTGCAAGAAACAAGGAGAACAGCATCGCAATTCTCCACACAATCTGTTTAAATGATCGATCGAGGTGGAAGGAAATGAGGGAAGCCGAGAAAACTTACGGTTTGATCTCCGATCTTGCTCAGAACGGAACGTCAAGAGCGAAAAGGAAGGCAACCGGCATACTCGAGAGACTGAACCGGGCCGTTAACATCACTCACACTGCCTAA 594 46.3 MEALRSGTIETRTNSAATLFTLSALDSNKALIGKAGALKPLIDLLEEGHPLAMKDVASAIFNLCIIHENKARAVRDGAVRVILRKLMKNVHVDELLAILAMLSSNQKAVEDMGEVEAVLCLLGIIRDNPCARNKENSIAILHTICLNDRSRWKEMREAEKTYGLISDLAQNGTSRAKRKATGILERLNRAVNITHTA 197
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 38179131 38179724 + Bma009950.1 Bma13g00879 93608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00879 197 Pfam Armadillo/beta-catenin-like repeat 28 64 IPR000225 GO:0005515
Bma13g00879 197 SUPERFAMILY ARM repeat 2 187 IPR016024 -
Bma13g00879 197 Gene3D - 1 194 IPR011989 -
Bma13g00879 197 PANTHER U BOX DOMAIN-CONTAINING 1 195 - -
Bma13g00879 197 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 9 1 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00879 Bma-Chr13:38179131 Bma15g00525 Bma-Chr15:6058597 3.23E-94 dispersed
Bma13g00879 Bma-Chr13:38179131 Bma13g00880 Bma-Chr13:38208634 6.04E-100 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00879 - - csin:114289569 321.242