Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma13g00880 | ATGAAAGACGTAGCTTCTGCAATCTTTAATCTCTGTATAATCCATGAGAACAAGGCAAGAGCAGTCCGAGACGGGGCTGTCAGAGTGATTTTAAGGAAGCTGATGAAAAATGTCCATGTTGATGAGTTATTAGCCATTCTTGCAATGCTTTCGAGCAATCAGAAGGCCGTTGAGGAAATGGGGGAGGTCGAAGCCGTTCTTTGCTTGCTCGGCATAATCCGGGACAATCCTTGTGCAAGAAACAAGGAGAACAGCATCGCAATTCTCCACACAATCTGTTTAAATGATCGATCGAGGTGGAAGGAAATGAGGGAAGCCGAGAAAACTTACGGTTTGATCTCCGATCTTGCTCAGAACGGAACGTCAAGAGCGAAAAGGAAGGCAAACGCCATACTCGAGAGACTGAACGGGGCCGTTAACATCACTCACACTGCCTAA | 438 | 46.35 | MKDVASAIFNLCIIHENKARAVRDGAVRVILRKLMKNVHVDELLAILAMLSSNQKAVEEMGEVEAVLCLLGIIRDNPCARNKENSIAILHTICLNDRSRWKEMREAEKTYGLISDLAQNGTSRAKRKANAILERLNGAVNITHTA | 145 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 38208634 | 38209071 | + | Bma009951.3 | Bma13g00880 | 93609 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma13g00880 | 145 | Gene3D | - | 1 | 140 | IPR011989 | - | |
| Bma13g00880 | 145 | SUPERFAMILY | ARM repeat | 3 | 135 | IPR016024 | - | |
| Bma13g00880 | 145 | PANTHER | U BOX DOMAIN-CONTAINING | 1 | 143 | - | - | |
| Bma13g00880 | 145 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 9 | 1 | 143 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma13g00880 | Bma-Chr13:38208634 | Bma15g00525 | Bma-Chr15:6058597 | 1.80E-63 | dispersed | |
| Bma13g00879 | Bma-Chr13:38179131 | Bma13g00880 | Bma-Chr13:38208634 | 6.04E-100 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma13g00880 | - | - | csin:114289569 | 233.032 |