Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00895 ATGACTTGTTTTCCTTCCTGGTTCAGAAAAAGGCTTCATTCACCAGAAGGAAGATTGGATGTTGCTGAAGAATTATCGGGCATCCATGGCGTTAAATTTTACACATACAAAGAGCTAAGGAATGCAACCGAAGACTTTAGTCCGATAAATAAAATCGGGGAGGGTGGTTATGGCTCCGTCTATAAGGCAAAGTTAAAGCACGGCGAAATTGCAGCCGTGAAAATTCTATCCGCTGAATCGAGGCAAGGGGTTAAAGAATTTTTGACAGAAGTTACTGTCATCGCAGAGATACAGCATGAGAATTTGGTCATGCTCTACGGCTGTTGCGTGGAGGGAAATCAAAGAATCCTCGTCTACAACTACCTCGAAAACAACAGCCTTGCTCAAACTCTTCTTGGGAAAGACAACAAAAATATGAACTTCAACTGGCAGACCAGGTCTAATATTTGCATCGGAATTGCACGAGGGCTTGCCTTTCTTCACGAGGAAGTACGCCCACATATCATTCACAGAGACATCAAAGCAAGTAATATTCTGCTCGACGCCAACTTATCGCCTAAAATTTCGGATTTTGGTCTTGCAAAACTTATCGCGCCTAGTGTGTCTCACGTAAGCACACGAGTTGCAGGAACAATTGGATATCTAGCACCCGAGTATGCGATAAGAGGACAAGTGACCAGAAAGTCGGATATTTACAGTTTCGGTGTTCTCCTCGTGGAAATTGTCAGTGGAAGGTGTCACACAAATAGGCATCTCCCGGCAGGCGAGCAGTATCTTCTAGAAAGGACATGGGATCTTTTTGAGCGCAAAGAGCTAGTCGAGTTGGTAGATACATCGTTAGATGGAAAGTTCGATGTCGTGGAGGCTTGTCGATATCTAAAGATCGGTCTTCTTTGCACCCAAGACAGTCCAAAGCTCCGGCCAAAGATGTCAACCGTCATAAAGATGCTAAAAGGAGATATCGAGGTTGACGACAATTCGATAACACAGCCTGGGTTAATTTCAGATTTGATGGATTTTAAAGGTCCGGAGCCGAGCAAAAAGAAGCCGAATAAATCGAACCATTCTTCTTACGAAGACAATACTTCTGGGTCCGAAAATCCTGACAGCTATACCTTGTCGTCCGGAAACTCTACCGTTCCGACTTCGAGTTTTACCACAAAATACGAATAG 1173 43.99 MTCFPSWFRKRLHSPEGRLDVAEELSGIHGVKFYTYKELRNATEDFSPINKIGEGGYGSVYKAKLKHGEIAAVKILSAESRQGVKEFLTEVTVIAEIQHENLVMLYGCCVEGNQRILVYNYLENNSLAQTLLGKDNKNMNFNWQTRSNICIGIARGLAFLHEEVRPHIIHRDIKASNILLDANLSPKISDFGLAKLIAPSVSHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCHTNRHLPAGEQYLLERTWDLFERKELVELVDTSLDGKFDVVEACRYLKIGLLCTQDSPKLRPKMSTVIKMLKGDIEVDDNSITQPGLISDLMDFKGPEPSKKKPNKSNHSSYEDNTSGSENPDSYTLSSGNSTVPTSSFTTKYE 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 38913506 38918248 - Bma009969.1 Bma13g00895 93624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00895 390 MobiDBLite consensus disorder prediction 335 390 - -
Bma13g00895 390 SMART serkin_6 46 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g00895 390 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Bma13g00895 390 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 2 367 - -
Bma13g00895 390 MobiDBLite consensus disorder prediction 356 390 - -
Bma13g00895 390 Gene3D Phosphorylase Kinase; domain 1 18 121 - -
Bma13g00895 390 SUPERFAMILY Protein kinase-like (PK-like) 24 317 IPR011009 -
Bma13g00895 390 Pfam Protein kinase domain 48 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g00895 390 ProSiteProfiles Protein kinase domain profile. 46 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g00895 390 MobiDBLite consensus disorder prediction 341 355 - -
Bma13g00895 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Bma13g00895 390 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
Bma13g00895 390 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 367 - -
Bma13g00895 390 CDD STKc_IRAK 52 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01634 Bma-Chr4:52258227 Bma13g00895 Bma-Chr13:38913506 5.54E-125 dispersed
Bma13g00895 Bma-Chr13:38913506 Bma13g00932 Bma-Chr13:39816946 1.16E-164 dispersed
Bma03g00335 Bma-Chr3:2500228 Bma13g00895 Bma-Chr13:38913506 1.64E-119 transposed
Bma10g00447 Bma-Chr10:5043720 Bma13g00895 Bma-Chr13:38913506 0 wgd
Bma10g00476 Bma-Chr10:5478334 Bma13g00895 Bma-Chr13:38913506 6.84E-159 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66853 PF00069 Pkinase 2.70E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00895 - - zju:107423327 548.895