Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma13g00909 | ATGGCGGATGAGGTGGTTCTTTTGGATTTCTGGCCGAGCCCTTTTGGGATGAGGTTGAGGATCGCTTTGGCTGAGAAGGGGATCAAGTATGAGTACAAGGAGGAGGATTTGAGGAACAAGAGCCCTCTTCTTCTTCAGATGAACCCGATTCACAAGAAGATTCCGGTTCTCATTCACAATGGCAAGTCTGTTTGTGAATCCCTGATTGCTGTCCAGTATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGCTTCCGGCGGATCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTCGACAAGAAGGCATTGTTTGAAGTGATAATAAGCAGTTCGATGTGGGTGTATGAGAATGAACAGATTTACGAGCTAGGGAGGAAGCTATGGTCGACAAAAGGAGAAGAACATGAAACGGCAAAGGCGGAATATCTGGAGTGCTTGAAGACGCTTGAAACTGAGCTAGGAGACAAACCCTTCTTCGGAGGGGAGTGTTTTGGATACGTCGATGTGGTGTTCATTCCGTTCTCTACGTGGTTTTTGGCTTACGAGACGCACGGGAAGTTCACGACGGAGGAAGAATGTCCTAAACTCATGGCTTGGGTCAAGAGATGCTTGGAGAAAGAGAGTGTTTCAAAGTCTCTTCCTGAGCAGGAGAAGGTCCTTGGCTTTGTTTCCCATTTGAAAAAGGTATTTGGGATAGAGTAG | 714 | 47.34 | MADEVVLLDFWPSPFGMRLRIALAEKGIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKSVCESLIAVQYIDEVWPEKSPLLPADPFLRSQARFWADYVDKKALFEVIISSSMWVYENEQIYELGRKLWSTKGEEHETAKAEYLECLKTLETELGDKPFFGGECFGYVDVVFIPFSTWFLAYETHGKFTTEEECPKLMAWVKRCLEKESVSKSLPEQEKVLGFVSHLKKVFGIE | 237 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 39463942 | 39465168 | + | Bma009985.2 | Bma13g00909 | 93638 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma13g00909 | 237 | SFLD | Glutathione Transferase (cytosolic) | 6 | 209 | IPR040079 | - | |
Bma13g00909 | 237 | SUPERFAMILY | GST C-terminal domain-like | 76 | 233 | IPR036282 | - | |
Bma13g00909 | 237 | SUPERFAMILY | Thioredoxin-like | 5 | 105 | IPR036249 | - | |
Bma13g00909 | 237 | PANTHER | GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN | 4 | 106 | - | - | |
Bma13g00909 | 237 | Pfam | Glutathione S-transferase, C-terminal domain | 142 | 206 | - | - | |
Bma13g00909 | 237 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Bma13g00909 | 237 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Bma13g00909 | 237 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 106 | IPR045073 | - | |
Bma13g00909 | 237 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 114 | 230 | IPR045073 | - | |
Bma13g00909 | 237 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Bma13g00909 | 237 | PANTHER | GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN | 114 | 230 | - | - | |
Bma13g00909 | 237 | Pfam | Glutathione S-transferase, N-terminal domain | 6 | 76 | IPR004045 | - | |
Bma13g00909 | 237 | CDD | GST_C_Tau | 89 | 230 | IPR045074 | GO:0004364|GO:0006749 | |
Bma13g00909 | 237 | Gene3D | - | 88 | 237 | - | - | |
Bma13g00909 | 237 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 226 | IPR010987 | - | |
Bma13g00909 | 237 | SFLD | Main (cytGST) | 6 | 209 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma13g00909 | Bma-Chr13:39463942 | Bma08g00281 | Bma-Chr8:3817640 | 2.98E-46 | dispersed | |
Bma13g00909 | Bma-Chr13:39463942 | Bma13g00910 | Bma-Chr13:39481538 | 1.82E-128 | tandem | |
Bma05g01266 | Bma-Chr5:52026871 | Bma13g00909 | Bma-Chr13:39463942 | 3.94E-50 | transposed | |
Bma10g00468 | Bma-Chr10:5316980 | Bma13g00909 | Bma-Chr13:39463942 | 1.58E-113 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma13g00909 | K00799 | - | tcc:18594547 | 354.369 |