Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00909 ATGGCGGATGAGGTGGTTCTTTTGGATTTCTGGCCGAGCCCTTTTGGGATGAGGTTGAGGATCGCTTTGGCTGAGAAGGGGATCAAGTATGAGTACAAGGAGGAGGATTTGAGGAACAAGAGCCCTCTTCTTCTTCAGATGAACCCGATTCACAAGAAGATTCCGGTTCTCATTCACAATGGCAAGTCTGTTTGTGAATCCCTGATTGCTGTCCAGTATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGCTTCCGGCGGATCCTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTCGACAAGAAGGCATTGTTTGAAGTGATAATAAGCAGTTCGATGTGGGTGTATGAGAATGAACAGATTTACGAGCTAGGGAGGAAGCTATGGTCGACAAAAGGAGAAGAACATGAAACGGCAAAGGCGGAATATCTGGAGTGCTTGAAGACGCTTGAAACTGAGCTAGGAGACAAACCCTTCTTCGGAGGGGAGTGTTTTGGATACGTCGATGTGGTGTTCATTCCGTTCTCTACGTGGTTTTTGGCTTACGAGACGCACGGGAAGTTCACGACGGAGGAAGAATGTCCTAAACTCATGGCTTGGGTCAAGAGATGCTTGGAGAAAGAGAGTGTTTCAAAGTCTCTTCCTGAGCAGGAGAAGGTCCTTGGCTTTGTTTCCCATTTGAAAAAGGTATTTGGGATAGAGTAG 714 47.34 MADEVVLLDFWPSPFGMRLRIALAEKGIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKSVCESLIAVQYIDEVWPEKSPLLPADPFLRSQARFWADYVDKKALFEVIISSSMWVYENEQIYELGRKLWSTKGEEHETAKAEYLECLKTLETELGDKPFFGGECFGYVDVVFIPFSTWFLAYETHGKFTTEEECPKLMAWVKRCLEKESVSKSLPEQEKVLGFVSHLKKVFGIE 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39463942 39465168 + Bma009985.2 Bma13g00909 93638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00909 237 SFLD Glutathione Transferase (cytosolic) 6 209 IPR040079 -
Bma13g00909 237 SUPERFAMILY GST C-terminal domain-like 76 233 IPR036282 -
Bma13g00909 237 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Bma13g00909 237 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 106 - -
Bma13g00909 237 Pfam Glutathione S-transferase, C-terminal domain 142 206 - -
Bma13g00909 237 CDD GST_N_Tau 5 78 - -
Bma13g00909 237 Gene3D Glutaredoxin 1 87 - -
Bma13g00909 237 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 106 IPR045073 -
Bma13g00909 237 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 114 230 IPR045073 -
Bma13g00909 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Bma13g00909 237 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 114 230 - -
Bma13g00909 237 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Bma13g00909 237 CDD GST_C_Tau 89 230 IPR045074 GO:0004364|GO:0006749
Bma13g00909 237 Gene3D - 88 237 - -
Bma13g00909 237 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 226 IPR010987 -
Bma13g00909 237 SFLD Main (cytGST) 6 209 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g00909 Bma-Chr13:39463942 Bma08g00281 Bma-Chr8:3817640 2.98E-46 dispersed
Bma13g00909 Bma-Chr13:39463942 Bma13g00910 Bma-Chr13:39481538 1.82E-128 tandem
Bma05g01266 Bma-Chr5:52026871 Bma13g00909 Bma-Chr13:39463942 3.94E-50 transposed
Bma10g00468 Bma-Chr10:5316980 Bma13g00909 Bma-Chr13:39463942 1.58E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00909 K00799 - tcc:18594547 354.369