Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00910 ATGGCGGATGAGGTGGTTCTTTTGGATTTCTGGGCCAGCCCTTTTGGGATGAGGGTGAGGGTCGCTTTGGCTGAGAAGGGTATCGGGTATGAGTACAAGGAGCAGGATTTGAGGAACAAGAGCCCTCTTCTTCTTCAGATGAACCCGATTCACAAGAAGATTCCGGTTCTCATTCACAATGGGAAGTCTGTTTGTGAATCCCTGATTGCTGTCCAGTATATTGACGAGGTTTGGCCGGAGAAGTCTCCATTGCTTCCGACCGATACTTTTCTCAGATCTCAGGCCAGGTTCTGGGCTGACTATGTCGACAAGAAGGTATTTGAGCTAGGGAAGAAGTTGTGGCTGACAAAAGGAGAAGAACTAGAAACAGCCAAGACTGAATATCTAGAGTGCTTGAAGGCTCTCGAGGCCGAGCTTGGAGACAAACCGTTCTTCGGAGGGGAGAGTTTTGGCTACGTCGACGTGGCGTTCATTCCGCATTACACGTGGTTTTCAGGCTACGAGATGTTTGGGAAGTTCAGAACGGAGGAGGAATGTCCTAAACTCATGGCTTGGGGCAAGAGATGCTTGGAGAAAGAGAGTGTTTCAAAGGCTCTCCCTGACCAAGCAAAGGTTTATGGCTTTATTTTGAAGTTTGCTGGAGTAGAGTAG 651 48.54 MADEVVLLDFWASPFGMRVRVALAEKGIGYEYKEQDLRNKSPLLLQMNPIHKKIPVLIHNGKSVCESLIAVQYIDEVWPEKSPLLPTDTFLRSQARFWADYVDKKVFELGKKLWLTKGEELETAKTEYLECLKALEAELGDKPFFGGESFGYVDVAFIPHYTWFSGYEMFGKFRTEEECPKLMAWGKRCLEKESVSKALPDQAKVYGFILKFAGVE 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39481538 39482847 + Bma009986.1 Bma13g00910 93639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00910 216 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Bma13g00910 216 Gene3D Glutaredoxin 1 87 - -
Bma13g00910 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Bma13g00910 216 Gene3D - 88 216 - -
Bma13g00910 216 CDD GST_N_Tau 5 78 - -
Bma13g00910 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 212 IPR045073 -
Bma13g00910 216 SFLD Glutathione Transferase (cytosolic) 2 211 IPR040079 -
Bma13g00910 216 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Bma13g00910 216 SUPERFAMILY GST C-terminal domain-like 76 213 IPR036282 -
Bma13g00910 216 SFLD Main.3: Omega- and Tau-like 2 211 IPR045073 -
Bma13g00910 216 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 212 - -
Bma13g00910 216 Pfam Glutathione S-transferase, C-terminal domain 121 185 - -
Bma13g00910 216 CDD GST_C_Tau 92 212 IPR045074 GO:0004364|GO:0006749
Bma13g00910 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00017 Bma-Chr10:282462 Bma13g00910 Bma-Chr13:39481538 7.30E-09 dispersed
Bma10g00468 Bma-Chr10:5316980 Bma13g00910 Bma-Chr13:39481538 1.21E-117 dispersed
Bma13g00910 Bma-Chr13:39481538 Bma01g01846 Bma-Chr1:66517704 1.76E-45 dispersed
Bma13g00909 Bma-Chr13:39463942 Bma13g00910 Bma-Chr13:39481538 1.82E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00910 K00799 - cpap:110812529 348.591