Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00923 ATGAAAAATCTAAGTGGTTCTATATTTCCAACTACCAGAGTAGCTTGGTGCTTAAAGAAAGATCTTCCATGCTCTGGAAAGGCTGAACATCATTCCCTTTTTATCAATTGTGGAGGAGGAAGAATGGAAATTGATGGTAACATATACGAAGAGGACTCGTTTGCTCAAGGTCAATCAAACTTTTATTCGGTCGGAGAAAGGTGGGGTTATAGCAGTACAGGGATTTTCGTGGGTAATAGGAATGCTCCTAACTTAGCAGACAACTCATTTGGTCTGAATGTGAGTGGTCCAAGCTTCTACAAGACTGCTCGACTCTCCCCCGTGTCGCTTAATTACTATGGCCTCTGTCTTCGAAAGGGAAGCTACAATGTCAAGCTGCATTTTGCTGAAATAATGTACTCGGATGACCAAACATTTAGTAGTTTGGGGAGGCGTATATTTGATGTCTCAGTTCAAGGAAATTTAGTTTTAAAGGATTTTAATATTGCGGAGAGAGCTGGGGGAGTTGGTAAGAACTTCACTTACGAGAATAAGCATGTTTTCGTTAATGGCAGCACTCTAGAGATCCACTTATACTGGGCGGGTAAAGGAACTACTGCTATTCCAGACAGAGGAGTTTATGGCCCTCTTATATCTGCGATCACAGTAACACCAAGCAAGTACTATAATGTTGAGACTGGAGGTTTATCCCCAGGAGCTATTGCTGGTATTGTAATTGCTTCATGTGTGCTAGTTATATTGGTACTTGTAGTCCTCCGAATCAAAGGTTACATATGTGCAAAGGAGATTGAAGACAGTGAATTACGCGGCCTAGAATTGCAAACAGGCTATTTCTCTTTGAGACAAATTAAATCTGCTACAGGCAATTTTGATCCTAAAAATAAGATAGGTGAAGGAGGCTTTGGACCAGTATACAAGGGAGTCCTTTTAGACGGATCTTTAATTGCCGTTAAGCAACTTTCCTCGAAATCGAAGCAAGGGAATCGTGAATTTGTCACTGAAATTGGCATGATATCGGCTTTGCAGCACCCAAATCTTGTTAAGCTTTATGGATGTTGCATTGAAGGACATCAATTATTGTTAGTATATGAATACATGGAAAATAATAGTCTTGCTCGTGCTCTCTTTGGTTCTGCGGAACACCAGCTCCACTTAGATTGGGCAACAAGGAAGAAGATATGCATGGGCATAGCAAGGGGATTAACTTATCTTCACGAGGAATCAAGGTTGAAAATTGTACACAGAGATATAAAGGCCACAAATGTGCTGCTTGATAAAAATCTAGCAGCAAAGATCTCTGACTTTGGTTTGGCTAAGCTTGATGAAGAGGAGAATACCCACATAAGCACTCGGATTGCTGGAACCATAGGCTACATGGCTCCTGAATATGCAATGAGGGGTTACTTAACTGACAAAGCAGATGTCTACAGCTTTGGTGTTGTGGCCTTGGAGATTGTCAGTGGAAAAAGCAACACAAATTATCGGCCAAAGGAAGATTTTGTTTATCTCCTTGATTGGGCATACGTCCTGCTGGAGCAAGGTAATCTTCTCGAACTCGTTGATCCGAGCCTTGGTTCAAACTACTCGAAGCAAGAGGCGATGAGGATGCTCAACGTGGCTCTCTTATGCACCAATCCATCTCCCACTCTCAGGCCACCCATGTCCTCTGTAGTGAGCATGCTGGACGGCAAACTTGCAGTCCAAGCACCCCTAGTCAAACGCACGATGGATCAGGACGCAAGATTTAAGGCCTTTGAGAAGCTTTCACAAGACAGCCAAACTATGGTCTCCTCAATCTCTCAGGACAGTCTTGTTCAGAAAAGCACGCTAGTGGACGGGCCTTGGGTCGATTCCTCAGATTCTGTTGAAAGTAGACATGAGAATGAGACCCGTGATTGTTCTTCATCAAGTAAGCTCCTTTAG 1923 42.85 MKNLSGSIFPTTRVAWCLKKDLPCSGKAEHHSLFINCGGGRMEIDGNIYEEDSFAQGQSNFYSVGERWGYSSTGIFVGNRNAPNLADNSFGLNVSGPSFYKTARLSPVSLNYYGLCLRKGSYNVKLHFAEIMYSDDQTFSSLGRRIFDVSVQGNLVLKDFNIAERAGGVGKNFTYENKHVFVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISAITVTPSKYYNVETGGLSPGAIAGIVIASCVLVILVLVVLRIKGYICAKEIEDSELRGLELQTGYFSLRQIKSATGNFDPKNKIGEGGFGPVYKGVLLDGSLIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGHQLLLVYEYMENNSLARALFGSAEHQLHLDWATRKKICMGIARGLTYLHEESRLKIVHRDIKATNVLLDKNLAAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEDFVYLLDWAYVLLEQGNLLELVDPSLGSNYSKQEAMRMLNVALLCTNPSPTLRPPMSSVVSMLDGKLAVQAPLVKRTMDQDARFKAFEKLSQDSQTMVSSISQDSLVQKSTLVDGPWVDSSDSVESRHENETRDCSSSSKLL 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39663759 39667229 + Bma010000.1 Bma13g00923 93652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00923 640 Gene3D Phosphorylase Kinase; domain 1 257 365 - -
Bma13g00923 640 SMART serkin_6 290 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g00923 640 CDD STKc_IRAK 296 563 - -
Bma13g00923 640 MobiDBLite consensus disorder prediction 619 633 - -
Bma13g00923 640 Gene3D - 28 220 - -
Bma13g00923 640 ProSiteProfiles Protein kinase domain profile. 290 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g00923 640 PANTHER - 11 623 - -
Bma13g00923 640 SUPERFAMILY Protein kinase-like (PK-like) 274 568 IPR011009 -
Bma13g00923 640 Pfam Protein tyrosine and serine/threonine kinase 293 561 IPR001245 GO:0004672|GO:0006468
Bma13g00923 640 MobiDBLite consensus disorder prediction 612 640 - -
Bma13g00923 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Bma13g00923 640 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 623 - -
Bma13g00923 640 Gene3D Transferase(Phosphotransferase) domain 1 366 575 - -
Bma13g00923 640 Pfam Malectin domain 33 214 IPR021720 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g01197 Bma-Chr10:42494915 Bma13g00923 Bma-Chr13:39663759 0 dispersed
Bma10g01199 Bma-Chr10:42539523 Bma13g00923 Bma-Chr13:39663759 5.22E-137 dispersed
Bma13g00923 Bma-Chr13:39663759 Bma13g00932 Bma-Chr13:39816946 9.70E-115 proximal
Bma07g00776 Bma-Chr7:22695389 Bma13g00923 Bma-Chr13:39663759 1.02E-155 transposed
Bma07g00788 Bma-Chr7:23300984 Bma13g00923 Bma-Chr13:39663759 0 transposed
Bma08g00532 Bma-Chr8:30994763 Bma13g00923 Bma-Chr13:39663759 0 transposed
Bma08g00814 Bma-Chr8:45755198 Bma13g00923 Bma-Chr13:39663759 5.33E-179 transposed
Bma12g00016 Bma-Chr12:632419 Bma13g00923 Bma-Chr13:39663759 2.04E-73 transposed
Bma14g00974 Bma-Chr14:11374834 Bma13g00923 Bma-Chr13:39663759 0 transposed
Bma10g00458 Bma-Chr10:5156089 Bma13g00923 Bma-Chr13:39663759 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66854 PF07714 PK_Tyr_Ser-Thr 3.20E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00923 - - csv:101211151 961.444