Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00924 ATGACTTCAGGAACGAAGCTACCAACATGGAGGGAGAGGGAAAACAACATGAGAAGGGAGAGGAGGAGGAGAGCGATTGCTGCTAAGATCTTCTCTGGCCTAAGAATGTACGGGAACTATAAGCTCCCCAAGCACTGCGATAACAATGAGGTCCTGAAAGCTCTCTGCGACGAGGCCGGTTGGACAGTTGAATCAGACGGCACCACCTACCGTAAGGGATATAAGCATGTTGAAAGATTAGATCTTGTTGGTGGACTGGCAGCCACTGCGTGCTCGTCTCAGCAACACAGTCCTTGTGCTTCCTACAATCCAAGCCCCGGTTCTTCTTCTATTCCCAGTCCAACCTCATCTTCTTATGCTGCTGCCAATCCGACTACGGATGGAAATTCCCTCATCCCATGGCTTAAAAATCTTTCAGCTGCCTCATCATATGCCTCCTCTTCTAAGCTCCCTCACCACTACATCCATGGAGGATCTATCAGTGCTCCAGTTACCCCACTGTTGAGCTCCCCGACTGCCATAACACCCCGAATTAAAGCCAATTGGGAAGAACAGGCCACCCAACCTGGTCGGAGTGCTCAACATTACCTGATCCTACCATCCTCTACTCCACCGAGCCCGGGTCGACAAATATTTCCAGATCCAGAATGGTTTTCCGGGCATAGAATTCCTCACAGTGGAACTAATTCTCCGACATTCAGCCTTGTCTCTTCTAACCCTTGTGGCTTTAAGGAAGAGGCTTTGGCTTGTGGTGGATTGCGTACCTGGACTCCCGGGCAAAGTCGAACATGCTCTCCTGCCCTTGCAGCAGGCTCTGATCACACTGCAGACATTCCAATGGCTGAAGTTGTTATAGATGAGTTTGCATTTGGAAGCAGTGCAGCTCGGATAGTAGTCAAGGCTTGGGAAGGAGAGAGGATCCATGAAGATAGTGGATCAGATGATCTCGAGCTGACTCTTGGGAGTTCAAGGACAAGGTATGTTTGA 987 49.85 MTSGTKLPTWRERENNMRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVESDGTTYRKGYKHVERLDLVGGLAATACSSQQHSPCASYNPSPGSSSIPSPTSSSYAAANPTTDGNSLIPWLKNLSAASSYASSSKLPHHYIHGGSISAPVTPLLSSPTAITPRIKANWEEQATQPGRSAQHYLILPSSTPPSPGRQIFPDPEWFSGHRIPHSGTNSPTFSLVSSNPCGFKEEALACGGLRTWTPGQSRTCSPALAAGSDHTADIPMAEVVIDEFAFGSSAARIVVKAWEGERIHEDSGSDDLELTLGSSRTRYV 328
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
13 39682631 39685301 - Bma010002.1 Bma13g00924 93653
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00924 328 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 139 IPR008540 -
Bma13g00924 328 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 327 - -
Bma13g00924 328 MobiDBLite consensus disorder prediction 97 122 - -
Bma13g00924 328 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 327 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02306 Bma-Chr1:80618849 Bma13g00924 Bma-Chr13:39682631 9.85E-38 dispersed
Bma09g00060 Bma-Chr9:1447336 Bma13g00924 Bma-Chr13:39682631 6.49E-43 dispersed
Bma10g01198 Bma-Chr10:42537550 Bma13g00924 Bma-Chr13:39682631 2.35E-126 dispersed
Bma13g00924 Bma-Chr13:39682631 Bma05g00956 Bma-Chr5:47754489 5.41E-13 dispersed
Bma14g00058 Bma-Chr14:757384 Bma13g00924 Bma-Chr13:39682631 2.10E-11 transposed
Bma14g00977 Bma-Chr14:11391587 Bma13g00924 Bma-Chr13:39682631 1.32E-128 transposed
Bma10g00457 Bma-Chr10:5150979 Bma13g00924 Bma-Chr13:39682631 7.22E-170 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58255 PF05687 BES1_N 4.40E-59 No_clan Bma TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00924 - - tcc:18594295 473.396