Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma13g00924 | ATGACTTCAGGAACGAAGCTACCAACATGGAGGGAGAGGGAAAACAACATGAGAAGGGAGAGGAGGAGGAGAGCGATTGCTGCTAAGATCTTCTCTGGCCTAAGAATGTACGGGAACTATAAGCTCCCCAAGCACTGCGATAACAATGAGGTCCTGAAAGCTCTCTGCGACGAGGCCGGTTGGACAGTTGAATCAGACGGCACCACCTACCGTAAGGGATATAAGCATGTTGAAAGATTAGATCTTGTTGGTGGACTGGCAGCCACTGCGTGCTCGTCTCAGCAACACAGTCCTTGTGCTTCCTACAATCCAAGCCCCGGTTCTTCTTCTATTCCCAGTCCAACCTCATCTTCTTATGCTGCTGCCAATCCGACTACGGATGGAAATTCCCTCATCCCATGGCTTAAAAATCTTTCAGCTGCCTCATCATATGCCTCCTCTTCTAAGCTCCCTCACCACTACATCCATGGAGGATCTATCAGTGCTCCAGTTACCCCACTGTTGAGCTCCCCGACTGCCATAACACCCCGAATTAAAGCCAATTGGGAAGAACAGGCCACCCAACCTGGTCGGAGTGCTCAACATTACCTGATCCTACCATCCTCTACTCCACCGAGCCCGGGTCGACAAATATTTCCAGATCCAGAATGGTTTTCCGGGCATAGAATTCCTCACAGTGGAACTAATTCTCCGACATTCAGCCTTGTCTCTTCTAACCCTTGTGGCTTTAAGGAAGAGGCTTTGGCTTGTGGTGGATTGCGTACCTGGACTCCCGGGCAAAGTCGAACATGCTCTCCTGCCCTTGCAGCAGGCTCTGATCACACTGCAGACATTCCAATGGCTGAAGTTGTTATAGATGAGTTTGCATTTGGAAGCAGTGCAGCTCGGATAGTAGTCAAGGCTTGGGAAGGAGAGAGGATCCATGAAGATAGTGGATCAGATGATCTCGAGCTGACTCTTGGGAGTTCAAGGACAAGGTATGTTTGA | 987 | 49.85 | MTSGTKLPTWRERENNMRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVESDGTTYRKGYKHVERLDLVGGLAATACSSQQHSPCASYNPSPGSSSIPSPTSSSYAAANPTTDGNSLIPWLKNLSAASSYASSSKLPHHYIHGGSISAPVTPLLSSPTAITPRIKANWEEQATQPGRSAQHYLILPSSTPPSPGRQIFPDPEWFSGHRIPHSGTNSPTFSLVSSNPCGFKEEALACGGLRTWTPGQSRTCSPALAAGSDHTADIPMAEVVIDEFAFGSSAARIVVKAWEGERIHEDSGSDDLELTLGSSRTRYV | 328 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 39682631 | 39685301 | - | Bma010002.1 | Bma13g00924 | 93653 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma13g00924 | 328 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 4 | 139 | IPR008540 | - | |
| Bma13g00924 | 328 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 4 | 1 | 327 | - | - | |
| Bma13g00924 | 328 | MobiDBLite | consensus disorder prediction | 97 | 122 | - | - | |
| Bma13g00924 | 328 | PANTHER | BES1/BZR1 HOMOLOG PROTEIN 3-RELATED | 1 | 327 | IPR033264 | GO:0003700|GO:0006351|GO:0009742 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma01g02306 | Bma-Chr1:80618849 | Bma13g00924 | Bma-Chr13:39682631 | 9.85E-38 | dispersed | |
| Bma09g00060 | Bma-Chr9:1447336 | Bma13g00924 | Bma-Chr13:39682631 | 6.49E-43 | dispersed | |
| Bma10g01198 | Bma-Chr10:42537550 | Bma13g00924 | Bma-Chr13:39682631 | 2.35E-126 | dispersed | |
| Bma13g00924 | Bma-Chr13:39682631 | Bma05g00956 | Bma-Chr5:47754489 | 5.41E-13 | dispersed | |
| Bma14g00058 | Bma-Chr14:757384 | Bma13g00924 | Bma-Chr13:39682631 | 2.10E-11 | transposed | |
| Bma14g00977 | Bma-Chr14:11391587 | Bma13g00924 | Bma-Chr13:39682631 | 1.32E-128 | transposed | |
| Bma10g00457 | Bma-Chr10:5150979 | Bma13g00924 | Bma-Chr13:39682631 | 7.22E-170 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 58255 | PF05687 | BES1_N | 4.40E-59 | No_clan | Bma | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma13g00924 | - | - | tcc:18594295 | 473.396 |