Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g00994 ATGGCAGATGAGTTTCAGACGAGTGGAAGCTGGTGGGAGTCGTCGTCGATGGAGTCTGTTTCTGTTTCTAGCAGTTCTTCTTTCGTATTCCATGATGCCCAGAAGCTTCAAGATTCTGATTCTTCAGCTGGTGATCCAAATTTGCAGATGATGGGTTTAGGTCTTTCTTCCCCCACCATTGAATGGAACCAAGCTTTACTTCTGGGAGAGAAGTCTGAAACCAGTTTCCGATCGATGCTTCAAGATAACATGAACTCAAACAGCAATTTTCACCAAGAAAGTGGGCAAAATCAATGGAGAGAGAGATTATTTTCTGGAGATAATTCATCAGAGGCCGAGTTTAAGCCATTGAATCGAGGTTTTTCGTTGGATCAACAACAGTTCAGCGCTCATAACTACAGTGGAGTTGATTCCACAGCAACAAGTTTAGGGTTATCGTCCAGCTTTCAAATGGATTCATCAGCTTTGTATGGAAATCCAACAACAATATTACAAGGATTCGAAAACCAGACGCAGCAAAACTCAAACTCCATGGGATTCTCTTATGGCGGAAATTTTCTCAAGAATTCGAATGAAATTCTGCCTTCTTCTTGGTCCTCTTCTAAAGTTCCTCAGTGTTTAAGAGCTTCATCTCCTAAACAACAGACCCACCATAGCCATTTGCATTTCTCTAACAATGCTCCCTTCTGGAACGCTTCAGAAGCCACCATGAAAGACACCAAGACAAGCTTTTTCCCTTCCCTGCAAACTCAATTTCACTCGCAATCTTTCGAGGAAAAGCCCAAGCAGAATATATCTGAAACTCGTGACTCAGGAACTGGGGCAAAGAAAAGTGGGAGCGAACCCACTTCCAAAAGGCCAAGAAATGAAGCGCCATCGCCATTGCCAGCTTTCAAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACTGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAGTTCCTACACGAACAAGTTAGTGTTTTAAGCACTCCATACATGAAAAATGGAGCTGCAATACAACATCAACAGAATTCTGATAAATCTAAGGAACAAGAAGGGCCCAAACAAGACCTTAGGAGCCGAGGGCTGTGTTTGGTACCAGTTTCAAGCACATTCCCAGTTACTCATGAAAGCACAGTTGATTATTGGACACCAACATTTGGAGGAACATTCAGATGA 1230 43.09 MADEFQTSGSWWESSSMESVSVSSSSSFVFHDAQKLQDSDSSAGDPNLQMMGLGLSSPTIEWNQALLLGEKSETSFRSMLQDNMNSNSNFHQESGQNQWRERLFSGDNSSEAEFKPLNRGFSLDQQQFSAHNYSGVDSTATSLGLSSSFQMDSSALYGNPTTILQGFENQTQQNSNSMGFSYGGNFLKNSNEILPSSWSSSKVPQCLRASSPKQQTHHSHLHFSNNAPFWNASEATMKDTKTSFFPSLQTQFHSQSFEEKPKQNISETRDSGTGAKKSGSEPTSKRPRNEAPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYMKNGAAIQHQQNSDKSKEQEGPKQDLRSRGLCLVPVSSTFPVTHESTVDYWTPTFGGTFR 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 42094371 42096692 + Bma010112.1 Bma13g00994 93723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g00994 409 MobiDBLite consensus disorder prediction 252 297 - -
Bma13g00994 409 MobiDBLite consensus disorder prediction 355 377 - -
Bma13g00994 409 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 20 399 - -
Bma13g00994 409 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 289 338 IPR011598 GO:0046983
Bma13g00994 409 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 20 399 - -
Bma13g00994 409 SMART finulus 300 344 IPR011598 GO:0046983
Bma13g00994 409 Gene3D - 299 367 IPR036638 GO:0046983
Bma13g00994 409 CDD bHLH_AtbHLH_like 295 346 IPR045239 -
Bma13g00994 409 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 299 355 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00524 Bma13g00994 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00857 Bma-Chr4:10845691 Bma13g00994 Bma-Chr13:42094371 1.36E-25 dispersed
Bma09g00947 Bma-Chr9:48840991 Bma13g00994 Bma-Chr13:42094371 9.96E-35 dispersed
Bma10g00524 Bma-Chr10:6086778 Bma13g00994 Bma-Chr13:42094371 0 dispersed
Bma11g00357 Bma-Chr11:3860039 Bma13g00994 Bma-Chr13:42094371 1.28E-73 dispersed
Bma11g00527 Bma-Chr11:6598293 Bma13g00994 Bma-Chr13:42094371 6.24E-34 dispersed
Bma13g00994 Bma-Chr13:42094371 Bma09g00617 Bma-Chr9:43393282 6.09E-12 dispersed
Bma13g00994 Bma-Chr13:42094371 Bma13g01005 Bma-Chr13:42313730 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g00994 - - pvy:116139949 512.686