Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma13g00994 | ATGGCAGATGAGTTTCAGACGAGTGGAAGCTGGTGGGAGTCGTCGTCGATGGAGTCTGTTTCTGTTTCTAGCAGTTCTTCTTTCGTATTCCATGATGCCCAGAAGCTTCAAGATTCTGATTCTTCAGCTGGTGATCCAAATTTGCAGATGATGGGTTTAGGTCTTTCTTCCCCCACCATTGAATGGAACCAAGCTTTACTTCTGGGAGAGAAGTCTGAAACCAGTTTCCGATCGATGCTTCAAGATAACATGAACTCAAACAGCAATTTTCACCAAGAAAGTGGGCAAAATCAATGGAGAGAGAGATTATTTTCTGGAGATAATTCATCAGAGGCCGAGTTTAAGCCATTGAATCGAGGTTTTTCGTTGGATCAACAACAGTTCAGCGCTCATAACTACAGTGGAGTTGATTCCACAGCAACAAGTTTAGGGTTATCGTCCAGCTTTCAAATGGATTCATCAGCTTTGTATGGAAATCCAACAACAATATTACAAGGATTCGAAAACCAGACGCAGCAAAACTCAAACTCCATGGGATTCTCTTATGGCGGAAATTTTCTCAAGAATTCGAATGAAATTCTGCCTTCTTCTTGGTCCTCTTCTAAAGTTCCTCAGTGTTTAAGAGCTTCATCTCCTAAACAACAGACCCACCATAGCCATTTGCATTTCTCTAACAATGCTCCCTTCTGGAACGCTTCAGAAGCCACCATGAAAGACACCAAGACAAGCTTTTTCCCTTCCCTGCAAACTCAATTTCACTCGCAATCTTTCGAGGAAAAGCCCAAGCAGAATATATCTGAAACTCGTGACTCAGGAACTGGGGCAAAGAAAAGTGGGAGCGAACCCACTTCCAAAAGGCCAAGAAATGAAGCGCCATCGCCATTGCCAGCTTTCAAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACTGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAGTTCCTACACGAACAAGTTAGTGTTTTAAGCACTCCATACATGAAAAATGGAGCTGCAATACAACATCAACAGAATTCTGATAAATCTAAGGAACAAGAAGGGCCCAAACAAGACCTTAGGAGCCGAGGGCTGTGTTTGGTACCAGTTTCAAGCACATTCCCAGTTACTCATGAAAGCACAGTTGATTATTGGACACCAACATTTGGAGGAACATTCAGATGA | 1230 | 43.09 | MADEFQTSGSWWESSSMESVSVSSSSSFVFHDAQKLQDSDSSAGDPNLQMMGLGLSSPTIEWNQALLLGEKSETSFRSMLQDNMNSNSNFHQESGQNQWRERLFSGDNSSEAEFKPLNRGFSLDQQQFSAHNYSGVDSTATSLGLSSSFQMDSSALYGNPTTILQGFENQTQQNSNSMGFSYGGNFLKNSNEILPSSWSSSKVPQCLRASSPKQQTHHSHLHFSNNAPFWNASEATMKDTKTSFFPSLQTQFHSQSFEEKPKQNISETRDSGTGAKKSGSEPTSKRPRNEAPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYMKNGAAIQHQQNSDKSKEQEGPKQDLRSRGLCLVPVSSTFPVTHESTVDYWTPTFGGTFR | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 42094371 | 42096692 | + | Bma010112.1 | Bma13g00994 | 93723 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma13g00994 | 409 | MobiDBLite | consensus disorder prediction | 252 | 297 | - | - | |
Bma13g00994 | 409 | MobiDBLite | consensus disorder prediction | 355 | 377 | - | - | |
Bma13g00994 | 409 | PANTHER | TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 | 20 | 399 | - | - | |
Bma13g00994 | 409 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 289 | 338 | IPR011598 | GO:0046983 | |
Bma13g00994 | 409 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 20 | 399 | - | - | |
Bma13g00994 | 409 | SMART | finulus | 300 | 344 | IPR011598 | GO:0046983 | |
Bma13g00994 | 409 | Gene3D | - | 299 | 367 | IPR036638 | GO:0046983 | |
Bma13g00994 | 409 | CDD | bHLH_AtbHLH_like | 295 | 346 | IPR045239 | - | |
Bma13g00994 | 409 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 299 | 355 | IPR036638 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma10g00524 | Bma13g00994 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00857 | Bma-Chr4:10845691 | Bma13g00994 | Bma-Chr13:42094371 | 1.36E-25 | dispersed | |
Bma09g00947 | Bma-Chr9:48840991 | Bma13g00994 | Bma-Chr13:42094371 | 9.96E-35 | dispersed | |
Bma10g00524 | Bma-Chr10:6086778 | Bma13g00994 | Bma-Chr13:42094371 | 0 | dispersed | |
Bma11g00357 | Bma-Chr11:3860039 | Bma13g00994 | Bma-Chr13:42094371 | 1.28E-73 | dispersed | |
Bma11g00527 | Bma-Chr11:6598293 | Bma13g00994 | Bma-Chr13:42094371 | 6.24E-34 | dispersed | |
Bma13g00994 | Bma-Chr13:42094371 | Bma09g00617 | Bma-Chr9:43393282 | 6.09E-12 | dispersed | |
Bma13g00994 | Bma-Chr13:42094371 | Bma13g01005 | Bma-Chr13:42313730 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma13g00994 | - | - | pvy:116139949 | 512.686 |