Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01021 ATGCCAACAGTTTGGTTTTCTCTGAAGAAGTCTTTGCATTGCAAATCAGAGCCGTCAGATGTCCACGACCCAAAATCAATCAGACATTTGAGTTCAATTTTGACCAAAAAAACAAGTAGAACAGGCTGTTCAGCAGGAAGATCAGGCTGTTCAAGGTCAATAGCAAATCTCAAAGATGTAATCCATGGCAGCAAAAGGCATCTAGAACGGCCACCAAGCTGTAGCCCAAGATCTATAGGAAGTAGTGAGTTTCTAAACCCAATTACTCACGAAGTAATTCTGAGTAACTCAAAATGCGAGCTCAAAATCACTGGCTATGGAGGTTTTCAAGATGGGTTTGGTAGTTCAGGCGGGACTGAAGCTCATAACAATGGCGGCTCAACTTTTGTGGGTACCTTACGACCGGGTACACCTGGGCCTGGAGGGTACCCTACGATGCACTATTTTAACCCTTCTTTTAGAACTTCGTCTGCTTCTTCAAGAAAGCACCCTTTTCTTGGATCAGAGAGTTGCAGAGAAGGGTCTGGCTATGGAGTTTCTCCAAAATCTGGGGGTGGAGCTGGAGTTCATTCAAGCAATAGGGTCTCTTTAGATGTAGATTCTGCTGTTATTGGCTCCTTTACAATCACTTGTCACAAATGTGGAGAGCAGTTTTGCAAAGGAGAAGCTGCTGAAGCTCACCATCTCTCTAAACATGCTGTAACCGAACTAATCGAGGGCGATTCCTCTCGGAAAATAGTCGAGATTATATGCCGATCGAGCTGGCTGAAATCGGAGAACCAATGCGGGAAGATAGAAAGAGTTTTAAAAGTTCACAACATGCAAAGAACGCTCGCCCGATTCGAGGAGTATCGAGAAATCGTGAAGGCCAAAGCCAGCAAACTCCCAAAAAAGCACCCTCGATGCCTGGCCGACGGCAACGAGCTGTTGAGATTTTACGGCACGACGGTGGCCTGTTCTCTCGGCCAAAGCGGCTCCTCGAGCCTTTGCTTGTCGGAAAAATGCAGTGTTTGCAGGATTATACGAAATGGGTTTACGGCAAAGAAGGAGTTGAAGGAAGGAGTAGGCGTATTTACGACTTCCACGAGTGCGAGAGCGTTCGAATCGATCGAAATGGTGGAAGAAGATGATATGATGATGATGAGAAAAGCTTTGATAGTTTGTAGGGTGATTGCAGGGAGAGTGCATAGACCTCTGGAGAACATTCAAGAAATGGCTGGGCTTGTAGGGTTTGATTCATTGGCTGGAAAAGTTGGTCTATATTCCAATATTGAAGAGCTGTATTTGCTCAGTCCCAAAGCTCTCCTCCCTTGCTTTGTTGTGATTTGCAAATCTTGA 1338 45.44 MPTVWFSLKKSLHCKSEPSDVHDPKSIRHLSSILTKKTSRTGCSAGRSGCSRSIANLKDVIHGSKRHLERPPSCSPRSIGSSEFLNPITHEVILSNSKCELKITGYGGFQDGFGSSGGTEAHNNGGSTFVGTLRPGTPGPGGYPTMHYFNPSFRTSSASSRKHPFLGSESCREGSGYGVSPKSGGGAGVHSSNRVSLDVDSAVIGSFTITCHKCGEQFCKGEAAEAHHLSKHAVTELIEGDSSRKIVEIICRSSWLKSENQCGKIERVLKVHNMQRTLARFEEYREIVKAKASKLPKKHPRCLADGNELLRFYGTTVACSLGQSGSSSLCLSEKCSVCRIIRNGFTAKKELKEGVGVFTTSTSARAFESIEMVEEDDMMMMRKALIVCRVIAGRVHRPLENIQEMAGLVGFDSLAGKVGLYSNIEELYLLSPKALLPCFVVICKS 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 42785489 42786935 - Bma010149.1 Bma13g01021 93750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01021 445 MobiDBLite consensus disorder prediction 117 131 - -
Bma13g01021 445 PANTHER - 2 445 - -
Bma13g01021 445 MobiDBLite consensus disorder prediction 117 137 - -
Bma13g01021 445 MobiDBLite consensus disorder prediction 160 192 - -
Bma13g01021 445 ProSitePatterns Zinc finger C2H2 type domain signature. 211 232 IPR013087 -
Bma13g01021 445 SUPERFAMILY ADP-ribosylation 234 444 - -
Bma13g01021 445 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 445 - -
Bma13g01021 445 Gene3D - 234 444 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g01021 Bma14g00361 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01569 Bma-Chr7:51067697 Bma13g01021 Bma-Chr13:42785489 5.58E-50 dispersed
Bma13g01021 Bma-Chr13:42785489 Bma01g00835 Bma-Chr1:7883422 3.82E-72 dispersed
Bma13g01021 Bma-Chr13:42785489 Bma14g00361 Bma-Chr14:4387186 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01021 - - tcc:18593697 660.603