Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01033 CTTCTAATTCTAATTTGTGGCGAGATAGATCCGTTTGCTGATGCAAATGCTGAGGACTCTAGTGCTGGGGCAAAAGAGTATGTGCATATTCGAATTCAACAGCGGAATGGTAGGAAGAGTCTTACAACTGTGCAGGGACTGAAGAAAGAATTCAGCTACAACAAGATATTGAAGGACCTCAAGAAGGAGTTTTGCTGCAATGGTACAGTTGTTCAGGATCCAGAGCTAGGCCAGGTTATCCAACTTCAAGGGGACCAACGGAAAAATGTCTCTACATTCCTCGTCGAGGCTAGTATTGTGAAGAAGGACAACATCAAGATTCATGGTTTCTGA 333 43.54 LLILICGEIDPFADANAEDSSAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVEASIVKKDNIKIHGF 110
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 42932287 42933175 + Bma010162.1 Bma13g01033 93762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01033 110 CDD eIF1_SUI1 26 109 IPR005874 GO:0003743
Bma13g01033 110 SUPERFAMILY eIF1-like 9 110 IPR036877 GO:0003743|GO:0006413
Bma13g01033 110 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 7 110 - -
Bma13g01033 110 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 7 110 - -
Bma13g01033 110 Pfam Translation initiation factor SUI1 25 97 IPR001950 GO:0003743|GO:0006413
Bma13g01033 110 PIRSF Transl_init_SUI1_Euk 2 110 IPR005874 GO:0003743
Bma13g01033 110 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 8 110 IPR005874 GO:0003743
Bma13g01033 110 ProSiteProfiles Translation initiation factor SUI1 family profile. 28 98 IPR001950 GO:0003743|GO:0006413
Bma13g01033 110 Gene3D - 3 110 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma10g00536 Bma13g01033 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g01033 Bma-Chr13:42932287 Bma14g00335 Bma-Chr14:4182271 6.00E-55 dispersed
Bma10g00536 Bma-Chr10:6541071 Bma13g01033 Bma-Chr13:42932287 1.91E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01033 K03113 - csv:101219651 198.364