Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01035 ATGAGGTGTTCTTTTAAACTATCGACATTACTTCTTTTGTTCATTCTTTCGCTAATCGCCGTCAGTTTCGGACAAGATTACGACGACGATGAGGTGGCAGCGCCTCCGCCGGAGCAAGAAGACTGCAACGGGATTTTCTTGTCCTACACGTTCATTTCCCGGCAGAAAGAGTATCCTCATGTGAAGAACGCGACGGCCCAGTCGTGGGCGTTCAAGTCTCAAGTTAGGATTTTGAACGCCGGCTCGACGGAGCTGAAGGCTTGGAAGGTCTTCATCGGCTTTCAACACCAAGAAATATTAGTGTCTGCCAGCGGCGCCGTCGTGGTCGATGGCACTGATTTTCCTGCCGCTGTAGGAAACGGCACAACATTGGCTGGATACCCAATGGCCGACTTGGAAACTGCCATTGATACCGCTGGAGATATTAATCAGATTCAGGCTCTAATTCAGCTGGTCGGAACGCAATTCGGCGTCAAACCATCCGGCACTCCGATGCCAAAGACGATCCGACTCGTTCATGATGGTTTTAAGTGCCCGGCATCTCACCTTCGCGGGAAGAACACGATGTATGTCTGCTGCAAAAAGGATCCGAAAGTGAAGTTGAAAGACAAGAAGACCAAGTTTTTGCCGAGGCAAAACGGCGATCTTTCACTAACATATGATGTGCTTCAAGCCTACGGAAACAACTACCTCGCACAAGTCACGATCGACAACAACCACCCGCTTGGCCGGCTCGATCACTGGAACTTGACCTGGGAGTGGATGAGAGGAGAGTTCATTCAAACCATGAGAGGAGCCTACACCCACAAAAGAGACTACTCCGAGTGTATTTACGGCACCGCCGGCCAATACTACTCCGATTTCGACTTCTCTCAGGTGATGAACTGCGAAAAGCATCCCGTAATTACTGATCTTCCGGCTGACCGAGCAAACGATGAAAAAGTGGGGAAGTTGCCTTATTGCTGCCGGAACGGTAGCCTCTTGCCTTCCGTGATGGACGCGAGCAAATCAAGGTCTATTTTCCAATTACAAGTCTTTAAGATGCCTCCAGATCTGAACCGAACTGCGCTCACCCCTCCACAAAAATGGAAGATCAACGGCGTTCTGAACCCAAATTACAAATGCGGGCCACCAATTCGGGTCGAGCCGACGGAGTTTCCCGACCCTAGTGGCCTTCAATCCACGAGCACCGCCATTGCTAGTTGGCAAGTCGTTTGCAATATTACACGGCCGAAACTCAAACAATCTCGGTGTTGTGTCTCGTTTTCGGCATACTATAACGACTCGGTTATTCCGTGCAATACTTGCGCTTGCGGCTGTGCCGACCAAGGCAACACCTGCGATGCCGATGCTGATCCAATGCTTCTTCCAGCTGAGGCTCTTCTTGTTCCATTTGATAACAGAACAGCAAAGGCAAAAGCCTGGGCTAAGATCAAACACTATCCAATCCCGAAGAAATTGCCGTGTCCAGACAATTGCGGCGTTAGCATCAACTGGCACATAAATTCCGATTATAGCAACGGATGGACGGCTCGGGTGACGCTCTTCAACTGGGAAGATTACCCGTTCGAGAACTGGTTTACCGCAATTCAGATGAAGAAAGCCAGCAAAGGTTACGAAAATGTCTACTCCTTCAATGGAACTAAACTTACTAATCTCAACAACACCATGTTCTTCCAAGGTCTACCTGGTTTGAACTATCTAGTGGGCGAAACAAACGGCTCGAATCCGAAAACCGATCCTCGAGTTCCCGGAAAGCAGCAATCGGTGATTTCATTCACGAAGAAGAACCTTCACGACCTCAATATTCGACTCGGCGACGGGTTCCCTTCGAAGCTGTTCTTCAACGGCGAAGAGTGCGCTCTTCCGACCGAAATTCCGTTGGCAAGCTCGGCATATCGGTTCCATACTGGTTTTACTTGGATCTTTCTCGTTTTGATCTTTACTTTCGGGTTTATGGCAGAACAACTCCATTGA 1977 49.27 MRCSFKLSTLLLLFILSLIAVSFGQDYDDDEVAAPPPEQEDCNGIFLSYTFISRQKEYPHVKNATAQSWAFKSQVRILNAGSTELKAWKVFIGFQHQEILVSASGAVVVDGTDFPAAVGNGTTLAGYPMADLETAIDTAGDINQIQALIQLVGTQFGVKPSGTPMPKTIRLVHDGFKCPASHLRGKNTMYVCCKKDPKVKLKDKKTKFLPRQNGDLSLTYDVLQAYGNNYLAQVTIDNNHPLGRLDHWNLTWEWMRGEFIQTMRGAYTHKRDYSECIYGTAGQYYSDFDFSQVMNCEKHPVITDLPADRANDEKVGKLPYCCRNGSLLPSVMDASKSRSIFQLQVFKMPPDLNRTALTPPQKWKINGVLNPNYKCGPPIRVEPTEFPDPSGLQSTSTAIASWQVVCNITRPKLKQSRCCVSFSAYYNDSVIPCNTCACGCADQGNTCDADADPMLLPAEALLVPFDNRTAKAKAWAKIKHYPIPKKLPCPDNCGVSINWHINSDYSNGWTARVTLFNWEDYPFENWFTAIQMKKASKGYENVYSFNGTKLTNLNNTMFFQGLPGLNYLVGETNGSNPKTDPRVPGKQQSVISFTKKNLHDLNIRLGDGFPSKLFFNGEECALPTEIPLASSAYRFHTGFTWIFLVLIFTFGFMAEQLH 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 42938329 42940379 + Bma010164.1 Bma13g01035 93764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01035 658 PANTHER COBRA-LIKE PROTEIN 7 7 656 - -
Bma13g01035 658 PANTHER COBRA-LIKE PROTEIN 10 7 656 - -
Bma13g01035 658 Pfam COBRA-like protein 230 409 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01310 Bma13g01035 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01143 Bma-Chr4:28850026 Bma13g01035 Bma-Chr13:42938329 0 dispersed
Bma05g01021 Bma-Chr5:48729417 Bma13g01035 Bma-Chr13:42938329 0 dispersed
Bma13g01035 Bma-Chr13:42938329 Bma05g00929 Bma-Chr5:47184372 4.34E-38 dispersed
Bma13g01035 Bma-Chr13:42938329 Bma07g01310 Bma-Chr7:48663140 1.36E-32 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01035 - - csv:101216608 1030.39