Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01099 GCAGGAGCTGATCCTTTGGTTGTAGCTCGTGGGGGGTTTTCTGGAGTGTTTCCTGATTCCAGTATACAAGCCTACAAAATGGCTTTAAATTTAAGTGTACCTGATGTAATCTTATGGTGTGATGTGCAGTTAACAAATGACGGAGTTGGAATTTGTTTGCCTGATCTGAAGCTAGAAAACTCCACGAACATTAACAACGTTTACAATGTTACGCCGGAGCTCTATCTCGTTAATGGCATCCCAAGCAGTGGATTGTTTTCTTTTGATTTCACTCTTGATGATCTAAAATACGTTAATGTCAGTCAAGGTGTTTACACTCGAAGTACTAAGTTTGATGCAAACAATTATGGTATTCTCACTGTACAAGACGTCGCAGGGCTTTCCCCGCCGGGATTATGGTTGAATATCCAGCATGATCTGTTTTTCTCACTACAGAATTTGAGTATGAAAAGCTTTGTAGTCTCTACATCCAAAAAAATCAACATCTCGTATATATCATCAACAGAGGTGAACTTTCTGAGAAATATCTCTTCAAGTTTCATACCGAGCACCACAAAGCTGATATTTCGGTTTTCTACTAAAGATGACATCGAGCCAACAACAAACCAGGCTTATGCATTGTTACTGAAAAATCTTACATTCATCAAAACATTTGCCTCTGGAATCCTTGTCCCCAAAACTTACATATGGCCGGTAGATGTTAACTATTATTTAGAACCCCATACATCTCTTGTCTCGGATGCTCATAATGAAGGACTAGAAGTTTTTGCGTCTGAGTTCTATAACGATGTTCCTATGAGTTACAATTATAGTTATGATCCCGTCTCTGAATACCTTAATCACGTCGACAATGGTGAGTTTTCTGTGGATGGTGTACTGTCTGATTTCCCGTCAACTGCATCTGAAGCTTTTAGTAAGTTCGCCTCTTTCAACTCTTTTAAATGCTATTTGTATCTTTCACATGCTTCAGCTAGGCCTTTGGTTATCTCAAGATATGGAGCAAGTGGTGATTTTCCAGGTTGTACTGATTTGGCATACAAAAAAGCAATATCGGACGGTGTTGATATTCTCGACTGTCCTGTTCAAATAACAAAGGACGGGACACTTTTTTGCTCAGGGTCCATTGATCTAACAGATAACACGACAATACTTGAATTAGGCCATTATCCAAAAAAAACTATCCCAGAGTTAAAGGTTAATCGTGGAATCTATACCTTTGACTTGACATGGCCTGAAATCAAGAATTTAACTCCAACAATATCAAACCCCTTTTCAGCATTTTGGATGTTCAGAAATCCGAAGTACAGAAATAGTGGGAAATATATGACTTTAGCTGAATTTTTGGCCTTGACAAAGAAAACAAGCACTATATCTGGAATCTTACTCATAATCGAGAATGTAGCTTACCTTGCTAGGCATAGTTTTGATGTAATTGATAAAGTCATCGAGGCCTTGACCGAAGCTGGTTATGGAGAGAAGATAGCTCAAAATGTCTTGATTCAGTCTTCTAATTCTTCTGTTTTAAGGAAATTCAAGGAGAAAAGCAATTATGAGCTTGTATACCAAGTTGACGAGAATGTTTGGGACATCCCATCGTCGACTATAGCAGTCATCAAGAGTTTTGCAAGTGCTGTGGTTATAAACAAGTTTTCTGTCTTTCCTAATAATCAGGATTTGTTCCTCGTTGAATTAACCGATGTTGTATCGAATCTACAATCATCTCGGCTTTCGGTTTATGTACAACTCTTCAGTAACGAGTTTGTCTCACAAGCTTATGATTTCTACTCGGACTCAACGATGGAGATCAACACATTCTCCGAGAGAGCCAAAGTTGATGGAGTTATCACAGAATTTCCATTCACAGCAGCTAGATATAAAAAAAATAGATGTTTAAACTTGGGAAGCAACAAACCACCTTATATGGATCCTGCTGACCCTGGCACACTCCTGCAGTTTGCTAAAGATTTGACCATTGCTTCGTCGCCTGGTCCTCTTCCGTACCTCACTCAATCGGAAGTGTTTGAGCCGCCATTGCCCGCCGTTTCTAAACAAGTTCCTCTAACTCCATCCCAAAGACCAAACGGACAGACTCAAACTCTACCATGCCATTTCTGCTACAATCTGCCTTTGCTCGTTGCTGCTCTTTTTCTGCTTCGACATGTACTACTCTGA 2172 39.59 AGADPLVVARGGFSGVFPDSSIQAYKMALNLSVPDVILWCDVQLTNDGVGICLPDLKLENSTNINNVYNVTPELYLVNGIPSSGLFSFDFTLDDLKYVNVSQGVYTRSTKFDANNYGILTVQDVAGLSPPGLWLNIQHDLFFSLQNLSMKSFVVSTSKKINISYISSTEVNFLRNISSSFIPSTTKLIFRFSTKDDIEPTTNQAYALLLKNLTFIKTFASGILVPKTYIWPVDVNYYLEPHTSLVSDAHNEGLEVFASEFYNDVPMSYNYSYDPVSEYLNHVDNGEFSVDGVLSDFPSTASEAFSKFASFNSFKCYLYLSHASARPLVISRYGASGDFPGCTDLAYKKAISDGVDILDCPVQITKDGTLFCSGSIDLTDNTTILELGHYPKKTIPELKVNRGIYTFDLTWPEIKNLTPTISNPFSAFWMFRNPKYRNSGKYMTLAEFLALTKKTSTISGILLIIENVAYLARHSFDVIDKVIEALTEAGYGEKIAQNVLIQSSNSSVLRKFKEKSNYELVYQVDENVWDIPSSTIAVIKSFASAVVINKFSVFPNNQDLFLVELTDVVSNLQSSRLSVYVQLFSNEFVSQAYDFYSDSTMEINTFSERAKVDGVITEFPFTAARYKKNRCLNLGSNKPPYMDPADPGTLLQFAKDLTIASSPGPLPYLTQSEVFEPPLPAVSKQVPLTPSQRPNGQTQTLPCHFCYNLPLLVAALFLLRHVLL 723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 43937359 43943342 + Bma010226.1 Bma13g01099 93828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01099 723 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 2 697 - -
Bma13g01099 723 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 2 697 - -
Bma13g01099 723 CDD GDPD_SHV3_repeat_1 5 303 - -
Bma13g01099 723 ProSiteProfiles GP-PDE domain profile. 326 626 IPR030395 GO:0006629|GO:0008081
Bma13g01099 723 SUPERFAMILY PLC-like phosphodiesterases 325 626 IPR017946 GO:0006629|GO:0008081
Bma13g01099 723 Pfam Glycerophosphoryl diester phosphodiesterase family 333 619 IPR030395 GO:0006629|GO:0008081
Bma13g01099 723 Pfam Glycerophosphoryl diester phosphodiesterase family 12 298 IPR030395 GO:0006629|GO:0008081
Bma13g01099 723 Gene3D Phosphatidylinositol (PI) phosphodiesterase 324 626 IPR017946 GO:0006629|GO:0008081
Bma13g01099 723 Gene3D Phosphatidylinositol (PI) phosphodiesterase 3 304 IPR017946 GO:0006629|GO:0008081
Bma13g01099 723 SUPERFAMILY PLC-like phosphodiesterases 5 303 IPR017946 GO:0006629|GO:0008081
Bma13g01099 723 ProSiteProfiles GP-PDE domain profile. 5 304 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g01099 Bma-Chr13:43937359 Bma14g00315 Bma-Chr14:3909676 0 dispersed
Bma13g01099 Bma-Chr13:43937359 Bma13g01101 Bma-Chr13:43974270 0 proximal
Bma13g01099 Bma-Chr13:43937359 Bma14g00313 Bma-Chr14:3882483 0 wgd
Bma13g01099 Bma-Chr13:43937359 Bma07g01273 Bma-Chr7:48272961 1.65E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01099 - - rcu:8277558 805.823