Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01101 GCAGGAGCTGATCCTTTGGTTGTAGCTCGTGGGGGGTTTTCTGGAGTGTTTCCTGATTCCAGTTTACAAGCCTACAAAATGGCTTTAAATTTAAGTGTACCCGATGTAATCTTATGGTGTGATTTGCAGTTAACAAATGACGGAGTTGGAATTTGTTTGCCTGATCTGAAGCTAGAAAACTCCACGAACATTGCAGATGTTTACAGTGATATGTACAAGCTCTATCTCGTCAATGGCATCCCAAGCAGAGGATGGTTTTCTTTTGATTTCACTCTCGACGATCTAAAACACGTTAATCTCAGTCAAGGTGTTTACACTCGAAGTACTAAGTTTGATGCAAACAATTATGGTATTCTCACTGTACAAGACGTCGCAGGGCTTTCCCCGCCGGGATTATGGTTGAATATCCAGCATGATATGTTTTTCTCACTACAGAATTTGAGTATGAAAAGCTTTGTAGTCTCTACATCCAAAAAAATCAACATCTCGTATATATCATCAACAGAGGTGAACTTTCTGAGAAATATCTCTTCAAGTTTCAAACCGAGCACCACAAAGCTGATATTTCGGTTTTCAACTAAAGATGACATTGAGCCAACAACAAACCAGGCTTATGCATTGTTACTGAAAAATCTTACATTCATCAAAACATTTGCCTCTGGAATCCTTGTCCCCAAAACTTACATATGGCCGGTAGATGTTAACTATTATTTAGAACCTCATACATCTCTCGTCTTGGATGCTCATAATGAAGGACTAGAAGTTTTTGCATCTGAGTTCTATAACGATGTTCCTATAAGTTACAATTATAGTTATGATCCCGTCTCTGAATACCTTAATCACATCGACAATGGTGAGTTTTCTGTGGATGGTGTACTGTCTGATTTCCCGTCAACTGCATCCGAAGCTTTTGGTAAGTTCGCCTCTTTCAACTCTTTTAAATACTCTAGGCCTTTGGTTATCTCAAGATATGGAGCAAGTGGTGATTTTCCGGGTTGTACTGATTTGGCATACAAAAAAGCAATATCGGACGGTGTTGATATTCTCGACTGTCCTGTTCAAATAACAAAGGACGGGACACTTTTTTGCTCAGGGTCCATTGATCTAACAGATAACACGACAATACGTGATTTAGGCCCCATCTATCCAAAAGAAACTATCCCAGAATTAAAGGTTAATCCTGGAATCTATACCTTCAACTTGACATGGCCTGAAATCAAGAATTTAACTCCAACAATATCAAACCCCTTTTCAGCATTTTCGATGTTCAGAAATCCAGAGTACAGAAATAGTGGGAAATATATGACTTTAGCTGAATTTTTGGCCTTGACAAAGAAAACAAGCACTATTTCTGGAATCTTACTCATAATAGAGAATGTAGCTTACCTTGCTAGGCAAAGTTTTGATGTAATTGATAAAGTCATCGAGGCCTTGACCGAAGCTGGTTATGGAGAGAAGATAGCTCAAAATGTCTTGATTCAGTCTTCTAATTCCTCTGTTTTAAGGAAATTCAAGGAGAAAAGCAATTATGAGCTTGTATACAGAGTTGACGAGAATGTTTGGGACATCCCATCGTCGACTATAGCAGACATCAAGAGTTTTGCAAGTGCTGTGGTTATAAACAAGTTTTCTGTCTTTCCTGATAATTATATGTTCCTTGTTGAATTAACCAATGTTGTATCGAATCTACGATCATCTCGGCTTTCGGTTTATGTACAACTCTTCAGTAACGAGTTTGTCTCACAAGCTTATGATTTCTACTCGGACTCAACAATGGAGATCAACACGTTCTCCGAGAGAGCCAAAGTTGATGGAATTATCACACAATTTCCATTCACAGCTGCTAGATATAAAAAAAATAGATGTTTAAACTTGGGAAGCAACAAACCACCTTACATGGATCCTGCTGACCCTGGCACACTCCTGCAGTTTACTAAAGATTTGTACATTGCTCAGTCGCCTGGTCCTCTTCCTTACCTCACTCAATCGGAAGTGTTTGAGCCGCCATTGCCTGCCGTTTCTAAACAAGTTCCTCAAACTCCATCCCGAAGACCAAATGGACAGACTCAAACTCTACCATGCCACTTCTGCTACAATCTGCCTTTGCTCGTTGCTGCTCTTTTTCTGCTTCGACATACACTACTCTGA 2148 39.53 AGADPLVVARGGFSGVFPDSSLQAYKMALNLSVPDVILWCDLQLTNDGVGICLPDLKLENSTNIADVYSDMYKLYLVNGIPSRGWFSFDFTLDDLKHVNLSQGVYTRSTKFDANNYGILTVQDVAGLSPPGLWLNIQHDMFFSLQNLSMKSFVVSTSKKINISYISSTEVNFLRNISSSFKPSTTKLIFRFSTKDDIEPTTNQAYALLLKNLTFIKTFASGILVPKTYIWPVDVNYYLEPHTSLVLDAHNEGLEVFASEFYNDVPISYNYSYDPVSEYLNHIDNGEFSVDGVLSDFPSTASEAFGKFASFNSFKYSRPLVISRYGASGDFPGCTDLAYKKAISDGVDILDCPVQITKDGTLFCSGSIDLTDNTTIRDLGPIYPKETIPELKVNPGIYTFNLTWPEIKNLTPTISNPFSAFSMFRNPEYRNSGKYMTLAEFLALTKKTSTISGILLIIENVAYLARQSFDVIDKVIEALTEAGYGEKIAQNVLIQSSNSSVLRKFKEKSNYELVYRVDENVWDIPSSTIADIKSFASAVVINKFSVFPDNYMFLVELTNVVSNLRSSRLSVYVQLFSNEFVSQAYDFYSDSTMEINTFSERAKVDGIITQFPFTAARYKKNRCLNLGSNKPPYMDPADPGTLLQFTKDLYIAQSPGPLPYLTQSEVFEPPLPAVSKQVPQTPSRRPNGQTQTLPCHFCYNLPLLVAALFLLRHTLL 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 43974270 43979640 + Bma010228.1 Bma13g01101 93830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01101 715 CDD GDPD_SHV3_repeat_1 5 303 - -
Bma13g01101 715 ProSiteProfiles GP-PDE domain profile. 318 618 IPR030395 GO:0006629|GO:0008081
Bma13g01101 715 SUPERFAMILY PLC-like phosphodiesterases 5 303 IPR017946 GO:0006629|GO:0008081
Bma13g01101 715 Pfam Glycerophosphoryl diester phosphodiesterase family 12 298 IPR030395 GO:0006629|GO:0008081
Bma13g01101 715 Pfam Glycerophosphoryl diester phosphodiesterase family 325 611 IPR030395 GO:0006629|GO:0008081
Bma13g01101 715 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 2 688 - -
Bma13g01101 715 ProSiteProfiles GP-PDE domain profile. 5 304 IPR030395 GO:0006629|GO:0008081
Bma13g01101 715 SUPERFAMILY PLC-like phosphodiesterases 317 618 IPR017946 GO:0006629|GO:0008081
Bma13g01101 715 Gene3D Phosphatidylinositol (PI) phosphodiesterase 316 618 IPR017946 GO:0006629|GO:0008081
Bma13g01101 715 Gene3D Phosphatidylinositol (PI) phosphodiesterase 3 304 IPR017946 GO:0006629|GO:0008081
Bma13g01101 715 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 2 688 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma13g01101 Bma14g00315 CCT
Bma07g01273 Bma13g01101 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g01101 Bma-Chr13:43974270 Bma14g00313 Bma-Chr14:3882483 0 dispersed
Bma13g01099 Bma-Chr13:43937359 Bma13g01101 Bma-Chr13:43974270 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01101 - - rcu:8277558 828.55