Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01124 ATGGCTTCAAAATCAGGTGCTCAAACTTCCATTGAAGGGCAGAGGAAAGTTCTCGGCGACCAAACAACAGAAGGAAACTCTCATAAGCCTCAACCTTTGCAGATTAGCAAAACAGGCAAATCAGAATCGGTCACCCCGAAAGACAATCCGTTAATTGTTCCGAAACTTCCTGTTGAAACTGCTGAAAATAAAGAAGTAATTAACTCTTTTCATCAAGAGTCTTCCACTCCAAATTCCTTAGCTGATAAACTACACTTGAATTTATCTGTTCTCGATTCTACCCAAGTTCCAACTAGTGTTGATGATCAAAAGAAGAAGACATTAGAAAAAGCAGCCATTTCGAAAGAGAGCGATGGAACCAAAAGTCATCCTATAACAAGCGGAAGTTCCAATAGTCGACCCGAGTTTATGGAGAGTGGAAAGAGTAGTAGTATTTGTAGGGGCAGCACGAGCAGTGATATGAGCGAGGAGAGTACATGTAGTAGTTTAAGTGGCACGATTAGCAAGCCTCATAAGGCAAACGATATAGGATGGGAAGCAATTCAAGCAGTTCGAGCCAAAGTCGGCGTTTTGGGTGTAAGCCATTTCAGACCCTTGAAGAGATTAGGATGTGGGGATATTGGATCCGTTTATCTCTCGGAATTGAGAGGGACAAAGTGCTATTTCGCAATGAAAGTTATGGACAAAGAATCTCTCGAGGGTCGGAAGAAACTGATTCGAGCTCAGACCGAAAGAGAGATACTTCAATCATTAGACCATCCTTTTCTTCCTACTTTGTATACTCACTTCGAGACTGATAAGTTATCTTGTTTAGTAATGGAGTTTTGCCCTGGAGGTGACTTGCACACTCTTCGGCAGAGACAACCCGGGAAATATTTTTCGGAGCAAGCTGTCAAGTTTTATGTGGCAGAAATTCTTCTTGCTCTAGAGTATCTCCACATGCTCGGGATTATTTATCGCGATCTGAAGCCAGAAAATGTTCTTGTGAGAGAGGATGGGCATATTATGCTTTCTGACTTCGACCTTTCTCTTCGTTGTGCCTTTAGCCCGACACTTGTGAAGTCTTCAGCGCCAGAGTCCGACCCCTTGAGGAAGAACCCTGCTTATTGCATCCAACCAGCCTGCATTGCACCCTCTTGCATTCAACCTTCATGTGTTGTTCCAACAACTTGCATTTCTCCTCGTTTCTTCCTAGGGAAATCGAAAAAAGACCGAAAACCCAAAAACGAAGCCGGAAACCAAGTCAGCCCGTTGCCAGAGCTGATTGCCGAGCCTACAAATGCTCGATCAATGTCATTTGTTGGAACCCATGAGTACTTAGCTCCTGAAATCATCAAGGGTGAAGGCCATGGCAGTGCTGTTGATTGGTGGACTTTTGGGATTTTTATCTATGAGCTTTTGTTTGGCAAGACTCCTTTCAAAGGGTCAGGCAATTTGGCCACCTTGGCCAACGTCGTGGGTCAACCTCTACGCTTTCCCGATTCTCCCGTGGTAAGCTTTTCAGCTAGGGATTTGATTAGAGGTTTACTTGTGAAAGAGCCTCAACATCGATTGGCGTACAAAAGGGGCGCTACTGAAATTAGACAACACCCATTTTTCGAAGGGGTTAACTGGGCGCTAGTTAGGTGTGCTAGCCCACCGGAGATTCCAAGACCGTTTGAAATCGAAAGAATTCCAGCTTCGACTTCGACAACAATAGGCAAAGGTGGTAATGCTTGTCCTGATCGAAGTAACTATTTGGAATTTGATTTCTTCTAA 1758 44.08 MASKSGAQTSIEGQRKVLGDQTTEGNSHKPQPLQISKTGKSESVTPKDNPLIVPKLPVETAENKEVINSFHQESSTPNSLADKLHLNLSVLDSTQVPTSVDDQKKKTLEKAAISKESDGTKSHPITSGSSNSRPEFMESGKSSSICRGSTSSDMSEESTCSSLSGTISKPHKANDIGWEAIQAVRAKVGVLGVSHFRPLKRLGCGDIGSVYLSELRGTKCYFAMKVMDKESLEGRKKLIRAQTEREILQSLDHPFLPTLYTHFETDKLSCLVMEFCPGGDLHTLRQRQPGKYFSEQAVKFYVAEILLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAFSPTLVKSSAPESDPLRKNPAYCIQPACIAPSCIQPSCVVPTTCISPRFFLGKSKKDRKPKNEAGNQVSPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFIYELLFGKTPFKGSGNLATLANVVGQPLRFPDSPVVSFSARDLIRGLLVKEPQHRLAYKRGATEIRQHPFFEGVNWALVRCASPPEIPRPFEIERIPASTSTTIGKGGNACPDRSNYLEFDFF 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 44342261 44344591 - Bma010253.1 Bma13g01124 93853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01124 585 MobiDBLite consensus disorder prediction 1 57 - -
Bma13g01124 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Bma13g01124 585 Gene3D Transferase(Phosphotransferase) domain 1 280 382 - -
Bma13g01124 585 Gene3D Transferase(Phosphotransferase) domain 1 427 550 - -
Bma13g01124 585 Gene3D Phosphorylase Kinase; domain 1 195 279 - -
Bma13g01124 585 MobiDBLite consensus disorder prediction 1 45 - -
Bma13g01124 585 Pfam Protein kinase domain 198 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g01124 585 Pfam Protein kinase domain 430 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g01124 585 SMART serkin_6 196 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g01124 585 MobiDBLite consensus disorder prediction 119 166 - -
Bma13g01124 585 CDD STKc_phototropin_like 194 552 - -
Bma13g01124 585 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL2 13 585 - -
Bma13g01124 585 PANTHER FLIPPASE KINASE 1-RELATED 13 585 - -
Bma13g01124 585 MobiDBLite consensus disorder prediction 112 166 - -
Bma13g01124 585 SUPERFAMILY Protein kinase-like (PK-like) 178 560 IPR011009 -
Bma13g01124 585 ProSiteProfiles Protein kinase domain profile. 196 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01630 Bma-Chr1:42931256 Bma13g01124 Bma-Chr13:44342261 0 dispersed
Bma06g01369 Bma-Chr6:50522493 Bma13g01124 Bma-Chr13:44342261 0 dispersed
Bma07g00187 Bma-Chr7:2396949 Bma13g01124 Bma-Chr13:44342261 4.40E-174 dispersed
Bma13g00510 Bma-Chr13:9806958 Bma13g01124 Bma-Chr13:44342261 0 dispersed
Bma13g01124 Bma-Chr13:44342261 Bma04g00574 Bma-Chr4:5221904 1.43E-157 dispersed
Bma14g00834 Bma-Chr14:9342648 Bma13g01124 Bma-Chr13:44342261 5.29E-124 dispersed
Bma13g01124 Bma-Chr13:44342261 Bma14g00904 Bma-Chr14:10219310 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66860 PF00069 Pkinase 1.30E-37 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01124 K08286 - zju:107434015 874.004