Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma13g01130 | ATGAATACCCATCATTTTCTCGGCCCTGGTTTACTGTATAATTCCAGCGCTACTGTTTTATCAAATCCTCCCGCCATTGATCATCACAGAGCTCGAGCCCTAACTTCTTCGTTCTGGGTCAGATTGGCAGTAAAAATATCTCGGGCAAGATGGTTCAATTTCTTGAGAAGAGTATTCCATTACCAAAATGGTTCGAGATCCGATCTCGGGTCGAATCCTTTCAACTCGAGCACTTGGATGATGCTGGAGCTTATAGCTTTGTTTCTTCAACTAAGCATTTCCGCATTCATCTTGGCCATTTCAAAGAGAGAGAAGCCAGTTTGGCCTATGAGAGTATGGATTATTGGTTATAACATTAGCTGTTTCCTCAGTCTGTTGCTACTCTATGGTCGTCATAGGCGGCTTCTTCTGTCTCAAACCGATGATTTCAACCTTTTGGACATCGAGCAGCAGAGGAGTAGTGAAGAATCGAGGATGTTGCATTTGATGAACAAATGTTGTACGACACTGGAGCTATTTTTCGCAATATGGTTCGTTATGGGCAATGTTTGGGTGTTCGATTCTCGATTCGAGTCTTTCACGATGGCCCCGAAGCTTCATGTTCTTTGCATCTCTCTCCTAGCTTGGAATGCCATTTGCTATTCTTTCCCTTTCCTTCTCTTCCTTCTGCTCTGCTGTTGTGTGCCATTGATTAGTACCCTTCTTGGCTACAACATGAATATGGGCTCCATTGATAGAGGAGCTTCCGACGATCAACTTTCCCGGATTTCGAGCTGGCGATACAAAACGGGAGATTCCAAATCGGAGCTCGGAATCATTCCTACTGAAGATCCAGAATGTTGTATTTGCCTTGCGAAGTATAAAGACCGGGAAGAAATCCGGGAGTTGCCGTGTTCGCATGTTTTTCATCTCAACTGTGTGGATCAATGGCTTAGAATTATATCAATTTGTCCTCTTTGCAAGCAAGAACTAGAGAGATAA | 981 | 43.63 | MNTHHFLGPGLLYNSSATVLSNPPAIDHHRARALTSSFWVRLAVKISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMMLELIALFLQLSISAFILAISKREKPVWPMRVWIIGYNISCFLSLLLLYGRHRRLLLSQTDDFNLLDIEQQRSSEESRMLHLMNKCCTTLELFFAIWFVMGNVWVFDSRFESFTMAPKLHVLCISLLAWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNMGSIDRGASDDQLSRISSWRYKTGDSKSELGIIPTEDPECCICLAKYKDREEIRELPCSHVFHLNCVDQWLRIISICPLCKQELER | 326 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 44393231 | 44394738 | + | Bma010259.1 | Bma13g01130 | 93859 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma13g01130 | 326 | PANTHER | C3H4 TYPE ZINC FINGER PROTEIN | 15 | 325 | - | - | |
Bma13g01130 | 326 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 237 | 325 | IPR013083 | - | |
Bma13g01130 | 326 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 15 | 325 | - | - | |
Bma13g01130 | 326 | Pfam | Ring finger domain | 279 | 321 | IPR001841 | - | |
Bma13g01130 | 326 | SUPERFAMILY | RING/U-box | 274 | 324 | - | - | |
Bma13g01130 | 326 | ProSiteProfiles | Zinc finger RING-type profile. | 280 | 321 | IPR001841 | - | |
Bma13g01130 | 326 | SMART | ring_2 | 280 | 320 | IPR001841 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma13g01130 | Bma14g00672 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma13g01130 | Bma-Chr13:44393231 | Bma14g00672 | Bma-Chr14:7287258 | 1.21E-128 | dispersed | |
Bma13g01130 | Bma-Chr13:44393231 | Bma01g01300 | Bma-Chr1:17778344 | 8.53E-56 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma13g01130 | - | - | qsu:112039218 | 472.626 |