Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01172 ACTGGAGGAAATTCATGGTCAACTGGACCAGCTCCTCCTCCTCCACCTGGTGGACAAGTTCATGCTAACAAGGAGTCGGAAAGGAAGGGTGCTGGGAAGTCGATTTTGAGTGCATTGGTAATAACCGGTGTAGCTTTGGGCATATTAATGATCCTTGTACTTGGAATTGCTGTTTTTTCGAGACGATCGTCTTCTCCTTCTATACACTTTCTCGATGAGGAGGCAGAACGAAGATCTTTTACTCCTCTTACATCTCAGGAGTTGCCCTCAACCTTCCGTCCTGAAATACCAAAAGACTTCAAAGAGCTTAAATCATTTGACTCATCTGCCTCAATTGATGCTAAGGGTTTGCAAAAATCTCCTTCAGTTGGCAATAAGCATTCAACTTCTGGTCGTAGACAGTCCTTTACTGATAGCGAATTTGCAAACCGTCTAAATGCTAGAAGAAGTATTTCAGCTTCTGCTACAAGTTATTCTTTGGCAGATTTGCAGACTGCCACTGCTAATTTTGCTACAGGACGTCTTCTTGGTGAGGGATCCATTGGACGTGTTTATAGGGCTAAATATGCTGATGGAAAGGTTACAGCTGTAAAAAAAATAGAGTCGTCTCTTTTTCAAGGACGGCAGCCGGATGAATTTTCTGAGATTGTGGCTAACATGGAGAAACTTCACCACCCAAACATTGCAGAGCTTGTAGGATATTGTTCAGAACAAGGGCATCACATGTTAGTCTTTGATTATTTCAGGAATGGCTCCCTTCATGAATACTTGCACATGTCAGATGACTTTAGCAAACCACTAACATGGAATACTAGAGTTAGAATCGCCTTGGGGATGGCACGGGCCATTGAGTACCTCCATGAGGTGTGTTCACCGTCTTTAATTCACAAGAACATTAAGTCGTCTAATATTTTGCTGGACACTGAGCTCAATCCCCATCTCTCTGACTGTGGATTGGCAACTTTCTATGAGCGTGCTAGCAAAAATCTGGAAGTTGGATACTGTGCCCCTGAGTGCAATGAGCCATCGGCTTATACATTGAAGAGTGATGTGTACAGTTTTGGAGTGGTGATGCTGGAGTTGTTGACGGGACGAATGCCTTTAGACAGTTCAAAAGCAAAGCCAGAACAATGCCTGGTCTGGTGGGCAAGCCCACAGCTCCATGACATTGATGCTTTGGCAAAAATGGTCGACCCTGCATTGCGTGGATTATACCCTCCCAAATCGGTTTCTCGGTTTGCTGATATCATTGCCCTCTGCGTACAGTCTGAGCCTGAATTTAGGCCTCCAATGTCAGAGGTGGTGCAAGCATTGGTCCGGTTAGTTCAACGATCGAGTATGACAATGAGGGATGATCTCGGAGCAAGCTTCTCGTCGGACGGATGA 1386 44.88 TGGNSWSTGPAPPPPPGGQVHANKESERKGAGKSILSALVITGVALGILMILVLGIAVFSRRSSSPSIHFLDEEAERRSFTPLTSQELPSTFRPEIPKDFKELKSFDSSASIDAKGLQKSPSVGNKHSTSGRRQSFTDSEFANRLNARRSISASATSYSLADLQTATANFATGRLLGEGSIGRVYRAKYADGKVTAVKKIESSLFQGRQPDEFSEIVANMEKLHHPNIAELVGYCSEQGHHMLVFDYFRNGSLHEYLHMSDDFSKPLTWNTRVRIALGMARAIEYLHEVCSPSLIHKNIKSSNILLDTELNPHLSDCGLATFYERASKNLEVGYCAPECNEPSAYTLKSDVYSFGVVMLELLTGRMPLDSSKAKPEQCLVWWASPQLHDIDALAKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVRLVQRSSMTMRDDLGASFSSDG 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 45031311 45035004 + Bma010310.1 Bma13g01172 93901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01172 461 SUPERFAMILY Protein kinase-like (PK-like) 151 438 IPR011009 -
Bma13g01172 461 MobiDBLite consensus disorder prediction 1 28 - -
Bma13g01172 461 Gene3D Phosphorylase Kinase; domain 1 132 247 - -
Bma13g01172 461 MobiDBLite consensus disorder prediction 112 139 - -
Bma13g01172 461 ProSiteProfiles Protein kinase domain profile. 170 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g01172 461 PANTHER OS01G0253100 PROTEIN 1 458 IPR045271 GO:0004714|GO:0006468
Bma13g01172 461 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 1 458 - -
Bma13g01172 461 Gene3D Transferase(Phosphotransferase) domain 1 248 456 - -
Bma13g01172 461 Pfam Protein tyrosine and serine/threonine kinase 172 438 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00660 Bma-Chr10:9492498 Bma13g01172 Bma-Chr13:45031311 6.41E-152 dispersed
Bma11g00016 Bma-Chr11:428358 Bma13g01172 Bma-Chr13:45031311 4.16E-67 dispersed
Bma13g01172 Bma-Chr13:45031311 Bma01g01204 Bma-Chr1:13833637 5.78E-73 dispersed
Bma13g01172 Bma-Chr13:45031311 Bma13g01189 Bma-Chr13:45177803 8.92E-144 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66861 PF07714 PK_Tyr_Ser-Thr 1.50E-44 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01172 - - jre:109004269 665.225