Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01189 ATGGTGAAGCACTGGAGCTGGAGCGCGCTGTTTTTGCTCATTAACGTCTGCATTCTGGAATGGAGGCCTAGTCTCGTATATGGAGCCACAGATCCAGGAGATGCTGCTGCTCTAAGGGTCTTGTACACCTCTTTGAATTCTCCACCTCAGTTAACCCAGTGGAGTGCAAATGGTGATGATCCGTGCGGGCAGTCATGGAAGGGTATTTCTTGCTCAGGCTCGCGGGTCACCGAAATTGTACTGTCTGGCCTGGGACTTTCTGGATCATTGGGATACCAGCTCACTAGTTTAACATCCACGTCCAAACTAGATGTGAGCAACAACAATCTTGCTGGAGAGATAGCTTATCAGCTACCTCCAAACTTAATCAGATTAGATCTTGGTCGTAATAATTTTAATGGCGGCATTCCTTACTCCATCTCTCAAATGACTACCCTACAGTACCTAAATATCAGCCATAACCAGCTTCAGAATCAACTGATCGATATGTTTGACAGCCTTTCATCGCTTGTCGCCCTGGATATTTCATATAATTCTTTGCCAGGTGCCCTCCCCAGGAGTTTTAGCTCCCTCTCTAGCATGAACACTATGTACTTGCAAAACAACCAATTCACTGGCACCATTGATGTCCTCGCAAATCTTCCGCTTCAAAATTTGAATATTGAGAATAACCGGTTTACTGGTTGGATTCCAGAGCAGTTGAAAAACATTAATTTGCAGTCGAATGGTAATTCTTGGAGTTCAGGACCTGCCCCCCCTCCTCCACCCGGTACACCACCAGCGCCCAAAAACAACCAAAATCGTGGCTCCAATGGAAATAATAGCCCCTCGGGTGGAGGTGGAGGTGGTGGTAAGTCAGGAATAGGAGGTGGTGCCATTGCTGGAATAGTTATATCTATTCTTGTCGTTGGATCGGTTATTGCCTTTTTCCTTGTAAAGAAAAGATCCAGGAAGTCATCCTCGGACATAGAAAAGCTCGATGACCGGTCTTTTGCGCCTCTTGTTTCGAATGAAGTTCAAGAAATGAAGTCAATAGAAACTCCCACCAAATTCAACGCAAAGACATTTGATCCGTCGATCGGATTAAATCTTAAACCCCCACCGGTTGACCATCACAAATCATTTGATGAGGATGATTTCGCCAAGAAAGCTCTAGTCAAGAAGAAGGCCAATACGCCTCCTTCAAATGTAAAATCATTTTCAATAGCTGATTTACAGATGGCTACCGGCAGCTTCAATGTCGAAAATCTTCTCGGCGAAGGGTCGTTCGGGCGTGTTTATCGAGCTCAGTTTGACGATGGAAAGGTCCTTGCTGTGAAAAATATAGATTCATCTGCAATATCCCGTGACTTTTTTGAAGATTTCACAGAAATCGTATCGAATATCTCCCAATTGCATCACCCAAATGTTACCGAGCTGATGGGTTACTGCTCGGAGCATGGGCAGCATCTCCTAGTTTATGAATTCCATAAAAATGGCTCCCTTCATGAATTCTTACATTTATCTGACGAATACACTAAGCCACTGACGTGGAACTCCCGTGTCAAAATTGCATTAGGAATCGCCCGAGCTTTAGAGTACTTGCATGAAGTTTGTTCACCATCAATTGTTCATAAAAATATAAAATCAGCAAATATATTACTGGACGTGGAGCTCAATCCTCACCTATCCGAATGTGGGCTGGCCAGTTTCATGCCGGATCAGGCATTGGATAACAATACAGGGTCTGGATACAGTGCCCCAGAAGTCACCATGTCTGGTCAATACACTCTGAAGAGCGACGTCTACAGTTTCGGAGTTGTCATGTTAGAGGTTCTTAGTGGCCGGAAACCATTTGACAGTACAAGACCGATGGCCGAACAATCCCTGGTTCGGTGGGCCACTCCTCGGTTGCATGACATTGATGCTTTATCGAAAATGGTCGATCCAGGACTCGAAGGGCTCTACCCTGCAAAATCTCTCTCTCGATTTGCAGATGTGATAGCTCTTTGCGTACAGCCTGAGCCGGAGTTTAGACCCCCTATGTCTGAAGTGGTGCAAGCGCTGGTTGTACTCGTGCAAAGGGCTAACATGAGCAAGAGAACAGTGAGAAACAATGACGGATCGCCCCCACGCTCTGATGCTCCCGACGCACTGTAA 2139 45.72 MVKHWSWSALFLLINVCILEWRPSLVYGATDPGDAAALRVLYTSLNSPPQLTQWSANGDDPCGQSWKGISCSGSRVTEIVLSGLGLSGSLGYQLTSLTSTSKLDVSNNNLAGEIAYQLPPNLIRLDLGRNNFNGGIPYSISQMTTLQYLNISHNQLQNQLIDMFDSLSSLVALDISYNSLPGALPRSFSSLSSMNTMYLQNNQFTGTIDVLANLPLQNLNIENNRFTGWIPEQLKNINLQSNGNSWSSGPAPPPPPGTPPAPKNNQNRGSNGNNSPSGGGGGGGKSGIGGGAIAGIVISILVVGSVIAFFLVKKRSRKSSSDIEKLDDRSFAPLVSNEVQEMKSIETPTKFNAKTFDPSIGLNLKPPPVDHHKSFDEDDFAKKALVKKKANTPPSNVKSFSIADLQMATGSFNVENLLGEGSFGRVYRAQFDDGKVLAVKNIDSSAISRDFFEDFTEIVSNISQLHHPNVTELMGYCSEHGQHLLVYEFHKNGSLHEFLHLSDEYTKPLTWNSRVKIALGIARALEYLHEVCSPSIVHKNIKSANILLDVELNPHLSECGLASFMPDQALDNNTGSGYSAPEVTMSGQYTLKSDVYSFGVVMLEVLSGRKPFDSTRPMAEQSLVRWATPRLHDIDALSKMVDPGLEGLYPAKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLVQRANMSKRTVRNNDGSPPRSDAPDAL 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 45177803 45183453 + Bma010329.1 Bma13g01189 93918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01189 712 Pfam Protein tyrosine and serine/threonine kinase 414 682 IPR001245 GO:0004672|GO:0006468
Bma13g01189 712 Pfam Leucine Rich Repeat 170 191 IPR001611 GO:0005515
Bma13g01189 712 Gene3D Transferase(Phosphotransferase) domain 1 491 702 - -
Bma13g01189 712 MobiDBLite consensus disorder prediction 248 262 - -
Bma13g01189 712 SUPERFAMILY L domain-like 31 238 - -
Bma13g01189 712 MobiDBLite consensus disorder prediction 240 283 - -
Bma13g01189 712 ProSiteProfiles Protein kinase domain profile. 412 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g01189 712 MobiDBLite consensus disorder prediction 263 280 - -
Bma13g01189 712 PANTHER OS01G0253100 PROTEIN 23 708 IPR045271 GO:0004714|GO:0006468
Bma13g01189 712 Gene3D Ribonuclease Inhibitor 31 255 IPR032675 -
Bma13g01189 712 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 23 708 - -
Bma13g01189 712 SUPERFAMILY Protein kinase-like (PK-like) 393 683 IPR011009 -
Bma13g01189 712 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Bma13g01189 712 ProSitePatterns Protein kinases ATP-binding region signature. 418 440 IPR017441 GO:0005524
Bma13g01189 712 Gene3D Phosphorylase Kinase; domain 1 375 489 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma09g01001 Bma13g01189 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00749 Bma-Chr12:34452225 Bma13g01189 Bma-Chr13:45177803 5.62E-37 dispersed
Bma13g01189 Bma-Chr13:45177803 Bma10g00543 Bma-Chr10:6598170 6.95E-79 dispersed
Bma10g00660 Bma-Chr10:9492498 Bma13g01189 Bma-Chr13:45177803 0 transposed
Bma13g01172 Bma-Chr13:45031311 Bma13g01189 Bma-Chr13:45177803 8.92E-144 transposed
Bma13g01189 Bma-Chr13:45177803 Bma09g01001 Bma-Chr9:49512925 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66862 PF07714 PK_Tyr_Ser-Thr 2.10E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01189 - - vvi:100249831 976.852