Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01228 ATGGCAGGGGGAAGAATAAGGGCCAAGCTCCGTCGGAGCCACCTCTATACTTTCTCATGTATGCGCCCAAGTACAATTGATGAGGATCCTCATCTGGTTCAAGGCCCTGGCTACTCGCGAACTGTACATTGCAACAATTCCAGTCTCCATCAGAAGAAGCCTCTAAAATATTGCTCAAATTTCATATCAACAACAAAGTATAATGTCCTCACATTCTTGCCCAAAGCCCTCTTTGAGCAGTTTCGAAGGGTTGCCAATTTGTACTTTCTTTTGGCTGCAATTTTGTCTCTAACGCCAGTTGCACCATTCTCAGCCATGAGCATGATTGCTCCTTTGGCTTTTGTTGTTGGGCTCAGTATGGCAAAGGAAGCTCTTGAGGACTGGAGAAGATTTGTGCAAGATATGAAGGTTAATCTCAGAAAAGTGTGTGTTCATAAAGGAGATGGCGTTTTTGGTTACAGACCATGGCATAAAATTCTGGTTGGCGATGTGGTGAAAGTTGAGAAGGACCAGTTCTTTCCTGCCGATTTGCTCCTCTTATCCTCAAGCTATGAAGATGGTATTTGTTATGTAGAGACTATGAACTTAGATGGAGAAACAAATTTGAAGGTAAAGCGATCTTTGGAAGTGACGTTGTCTTTGGATGACGATGGATCTTTCAAGGATTTTTCTGGAATGATTCGCTGTGAAGATCCAAACCCAAATCTTTACACATTTGTGGGTAATTTTGAATATGATCGTCAGGTTTATGCTCTCGATCCTGGCCAGATTCTTCTGAGAGATTCAAAACTAAGGAATACAGCTTATGCTTACGGAGTGGTTATATTCACTGGTCATGATAGCAAGGTTATGCAAAATGCGACTAAGTCCCCTTCAAAAAGAAGTAAAATAGAAAGGAAGATGGACAAAATTATTTACATTCTTTTCACCCTCCTTGTATTGATCTCATTGATCAGCTCGATAGGCTTTGCCGTGAAGACAAAATACCAAATGCCAGATTGGTGGTATTTGCGACCGGATCGTACCGATGCATTATACGACCCGAAACGGCCTGCCTTATCAGGACTTTTTCATCTGATTACTGCTTTAATTCTTTATGGGTATTTGATACCCATCTCACTTTATGTTTCGATCGAGGTCGTGAAGGTTTTGCAAGCAACCTTCATTAACCAGGATATACACATGTATGATGAAGAGAGTGGGAATACTGCTCAAGCACGGACATCAAATTTGAACGAGGAGTTGGGCCAGGTAGACACAATCCTCTCCGATAAAACAGGAACTTTGACGTGCAATCAGATGGATTTTCTGAAGTGTTCCATTGCTGGCACTGCATATGGTGTGCGATCTAGTGAAGTCGAAGTTGCTGCAGCAAAACAGATGGAAGATGACCTTCAGGAACAGGACACCGACTTCCCCATTTTTCCTGGCAGCAGAAATAGTGGGGTGCACAATAGCAGAAGAGGGTCAGAAATTGAACTCGAGACAGTAATAACTTCCAACGATGGGCAGAATCAGAAATCTGCTATTAAGGGCTTTAGTTTTGAGGATAACCGGCTCATGGAGGCGAATTGGTTGAAAGAGCCCAATCCTGAAGTCATTCTATTATTTTTCCGCATATTAGCAGTTTGTCACACTGCAATTCCTGAGCGTGACGAAGAGAATGGTGGGTTGACTTATGAAGCCGAGTCACCTGATGAAGGTGCATTTCTTGTTGCGGCCAGAGAATTTGGTTTTGAGTTTTGCAAAAGAACTCAATCAAGCTTAATTGTCCGGGAAAGATATTCTTCTTCAGGACAAGCAGTTGAGAGGGAGTACAAAATTCTTAGCCTCTTGGATTTCACCAGCAAGAGAAAGCGAATGACTGTCATTGTTCGAGATGAAGAAGGGCAAATTCTTCTTTTGTGCAAAGGTGCTGACAGCATCATTTTTGATCGATTAGCAAAGAATGGACGAATGTACCAGGATGTGACCACTAAGCATTTGAACGAATATGGAGAAGCTGGGTTGAGGACGCTAGCTCTAGCTTATAGAAAACTGGAGGAGTCAGAGTATTCTGCTTGGAACAGTGAGTTTCAGAAAGCCAAAACATCAATTGGTGGTGACAGGGAGGCCATGCTCGAGCAGTTATCGGATGTGATAGAAAGGGAGTTGATTCTTGTTGGTGCTACTGCCGTGGAGGACAAGTTGCAAAAAGGGGTGCCTCAATGTATAGACAAACTCGCCCAAGCTGGGCTCAAGATCTGGGTTTTGACAGGGGATAAGATGGAAACTGCTATCAACATAGGGTTTGCTTGCAGTTTGCTGAGGCAAGGTATGAAGCAGATATGCATAACGTCTCATTCGGACAGTTTAGCCCAAGATAGCGAGGAGGCTGTGAAAGAAAATATCACAAACCAAATTACCAATGCCTTACAAATGATCAAGCTAGAGAAGGACCCGCATGCTGCATTTGCTCTAATTATTGATGGGAAGACCCTAACATACGCGTTGCAGGATGACATGAAGCATCAATTTTTGGGATTAGCCGTGGGTTGTGCTTCTGTTATTTGTTGTCGTGTATCGCCCAAGCAGAAGGCGCTGGTAACTAGATTAGTCAAAGAAGGCACTGGAAAAACGACCTTGGCGATTGGTGATGGTGCAAATGACGTTGGAATGATCCAAGAGGCTGATATTGGCATTGGCATCAGCGGCGTGGAAGGTATGCAGGTTGTTGTGAAATCTTTGCAGGCTGTGATGGCTAGTGACTTCTCCATAGCTCAGTTCCGATTTTTGGAGAGGCTTCTTGTAGTCCATGGACACTGGTGCTACAAGAGGATTGCCCAAATGATTTGCTATTTCTTCTACAAGAATATTGCATTTGGACTTACCCTCTTCTACTTTGAGGCATTCACTGGGTTTTCTGGGCAATCGTTTCCTGCGCTGTATCAACAAGGACCGAAGAACTTGTTCTTTGACTGGTACAGAATCTTTGGTTGGATGGGAAACGGGCTTTATTCCTCGCTCATCACTTTCTTCCTCAGCATAATCATCTTCTACGACCAGGCTTTCCGAGCCGGAGGGCAGACTGCCGACATGGCGGCTGTGGGGACGACAATGTTCACTTGCATAATCTGGGCCGTAAATTGCCAGATCGCGCTCACGATGAGCCACTTCACGTGGATCCAACACCTTCTCGTGTGGGGGAGCATCGCCATGTGGTACCTCTTCATCTTGCTCTACGGCATGATGATCGTCTCCGGAAACGCCTACAAAATTCTCGTCGAAGCTCTTGCCCCTGCGCCAATCTTCTGGGCCACAACGTTATTAGTAACAGCCGCCTGTAATCTCCCTTATCTTGCTCATATATCCTACCAGAGATGTTTCAACCCAATGGATCATCACATCATCCAAGAGATCAAATATTACAAGAAAGACGTCCAAGACAGGCAGATGTGGACCCGAGAACGCTCAAAGGCCAGGCAAGAAACGAAGATCGGATTCACTGCCCGGGTTGACGCCAAGATCAGGCAGCTGAGGGGTAGGCTGCAGAAGAAGAGCTCGACTCTAAGCGTATAG 3558 44.74 MAGGRIRAKLRRSHLYTFSCMRPSTIDEDPHLVQGPGYSRTVHCNNSSLHQKKPLKYCSNFISTTKYNVLTFLPKALFEQFRRVANLYFLLAAILSLTPVAPFSAMSMIAPLAFVVGLSMAKEALEDWRRFVQDMKVNLRKVCVHKGDGVFGYRPWHKILVGDVVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEVTLSLDDDGSFKDFSGMIRCEDPNPNLYTFVGNFEYDRQVYALDPGQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSKIERKMDKIIYILFTLLVLISLISSIGFAVKTKYQMPDWWYLRPDRTDALYDPKRPALSGLFHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIHMYDEESGNTAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVEVAAAKQMEDDLQEQDTDFPIFPGSRNSGVHNSRRGSEIELETVITSNDGQNQKSAIKGFSFEDNRLMEANWLKEPNPEVILLFFRILAVCHTAIPERDEENGGLTYEAESPDEGAFLVAAREFGFEFCKRTQSSLIVRERYSSSGQAVEREYKILSLLDFTSKRKRMTVIVRDEEGQILLLCKGADSIIFDRLAKNGRMYQDVTTKHLNEYGEAGLRTLALAYRKLEESEYSAWNSEFQKAKTSIGGDREAMLEQLSDVIERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITSHSDSLAQDSEEAVKENITNQITNALQMIKLEKDPHAAFALIIDGKTLTYALQDDMKHQFLGLAVGCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGIGISGVEGMQVVVKSLQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSFPALYQQGPKNLFFDWYRIFGWMGNGLYSSLITFFLSIIIFYDQAFRAGGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLLVWGSIAMWYLFILLYGMMIVSGNAYKILVEALAPAPIFWATTLLVTAACNLPYLAHISYQRCFNPMDHHIIQEIKYYKKDVQDRQMWTRERSKARQETKIGFTARVDAKIRQLRGRLQKKSSTLSV 1185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 45525357 45529925 - Bma010371.1 Bma13g01228 93957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01228 1185 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 972 1184 - -
Bma13g01228 1185 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 356 467 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma13g01228 1185 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 844 966 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma13g01228 1185 Gene3D - 114 289 - -
Bma13g01228 1185 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 971 - -
Bma13g01228 1185 SFLD p-type atpase 406 935 IPR044492 -
Bma13g01228 1185 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 520 683 IPR023299 GO:0000166
Bma13g01228 1185 Pfam Cation transport ATPase (P-type) 544 647 - -
Bma13g01228 1185 Gene3D - 717 924 IPR023214 -
Bma13g01228 1185 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Bma13g01228 1185 PRINTS P-type cation-transporting ATPase superfamily signature 877 896 - -
Bma13g01228 1185 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1114 IPR023298 -
Bma13g01228 1185 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 971 - -
Bma13g01228 1185 Gene3D - 588 701 IPR023299 GO:0000166
Bma13g01228 1185 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 972 1184 - -
Bma13g01228 1185 Pfam Phospholipid-translocating P-type ATPase C-terminal 971 1124 IPR032630 -
Bma13g01228 1185 SUPERFAMILY Calcium ATPase, transduction domain A 143 287 IPR008250 -
Bma13g01228 1185 SUPERFAMILY HAD-like 410 928 IPR036412 -
Bma13g01228 1185 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Bma13g01228 1185 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Bma13g01228 1185 SFLD Haloacid Dehalogenase 406 935 - -
Bma13g01228 1185 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 971 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Bma13g01228 1185 Coils Coil 448 468 - -
Bma13g01228 1185 CDD P-type_ATPase_APLT_Dnf-like 59 1008 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma13g01228 Bma-Chr13:45525357 Bma14g01647 Bma-Chr14:34856873 0 dispersed
Bma10g00734 Bma-Chr10:11610621 Bma13g01228 Bma-Chr13:45525357 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01228 K01530 - csv:101221220 1960.27