Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma13g01247 ATGAAATTTCTACGATTTTTACAGTATTTTGTTATTCTTGTTCTATCTTTTCTTCAAATTTTATGTCACTGTTCATCTTACCCTACTCCCATGAATTGCACAGACACAAGTCGGCTGTGCACCTCATTTTTAGCCTTCAAACCCCAACCAAACCAGACCTTCGCCGTACTTCAGAGCATGTTCGACGTATTACCGGCGGACATCACCGTCGAAGGCAACGGCCACGACTACGTCTTCATCAAGAAAAACTGTTCGTGTTCGTCAACATCGAAGAAATACATCACAAACACTACATTTACCATCAAATCAAACGGGGGTTATGTCTACGATTTGGTAATTGACGCTTATCAGGGCCTCGCTTCCTTGCCCAACACAACGAGGGCGGCGAGGAGCGGAGCTGTAGTTTCTCTGAGGCTGTTTTGTGGGTGTTCGAGTGGGCTGTGGAATTACCTGATGAGCTATTTGTTGACAGAAGGAGATAGTATTCAATCTTTAGCTAGCAGATTTGGGGTCAGTATGGATAGCATTGAGGCAGTCAATGGAATTCTAAATCCCGATAATGTCTCTCTCGCTTCTCTGTATTACATTCCTTTGAATTCCGTTCCTGGGGAGCCTTATCCTTTGGACACTGATAGTCCACCCGCTCCTCCTCCTGCCCCTGCTCCATCTTCTGAGAATATTTCAGTTAAACAAGGGAATGACAAAGGTCATGCACCATATATATGGATTGTCGGGAGTTTGGGGGTTATTCTTGTTTTACTTTTATTAAGTATAGCTGTTTATGCATTCTTGAGGAAGTCAAGCTGCATTTCAAGTACTCGTAGAAGGCGTGCAAAAGATCCTATTCCTAACAGCAAGACTTCGCACAAGTTCCACGTTCTTCAGAAGCCGAGTTTTTTTTGTGCTTCAGGCAGGTATATTTGCTGCAGATCTGCAGATTGGAAGCAAACCAATGCGGAATCAAGCAATCTCCAGTCCACCATTCCTAAAGCTCTTGAAAACAGTGTATTGGATGTGGAAAAGCCTATGGTTTTTACATATGAAGAGATTTTTTCTTCCACCGATGGGTTTTCTGATTCAAGTCTTCTCGGTCATGGAACATATGGTTCCGTGTATTATGGCCTCCTTCGCGACCAGGAAGTTGCTGTAAAAAGAATGACTGCGACAAAGACAAAGGAGTTCATGTCAGAGCTGAAAGTCCTTTGCAAAGTTCATCATGCAAATTTGGTAGAGTTGATTGGATATGCGGCACATGAGGATGAGCTCTTTCTCATTTATGAATATGCTCAAAAGGGTCCACTTAGAAATCATTTACATGATCCGCATAACAAGGGTCATACATCACTTTCTTGGGTCACGAGGGTCCAGATTGCTTTAGATGCTGCTAGAGGTCTTGAATACATTCATGAGCACACGAAAAAGCATTATGTCCATCGAGATATCAAGACGAGTAATATTTTACTTGATGGTGCCTTTAGGGCGAAGATTTCTGATTTTGGGTTGGCAAAACTTGCTGCAAAAACTGGGGAGGGAGAAACTACAGTCACTAAAGTTGTTGGTACCTTTGGTTATCTGGCTCCCGAGTACTTGAGTGATGGTCTTGCAACGACCAAAAGTGATGTGTATGCTTTTGGGGTTGTTCTTTTTGAAATTATATCAGGAAAGGAGGCCATTATTCGAACGGAAGGGACTGGTACTAAAAATCCTGAAAGGCGCTCACTTGCATCCATTATGTTAGCTGCTCTTAGAACGTCACCTGATTCCACAAGCATGGCCAGCCTGAAAGACCTTGTGGATCCTAATATGATGGATTTGTATCCCCATGATTGTCTTTTCAAGATGGGGAAACTGGGGAAGCAATGTGTGGAGGAGGATCCAATATTGAGACCAGACATGAAACAAGTAGTAATTACACTGTCCCAGATCTTACTTTCTTCTATCGAGTGGGAAGCAACTCTGGCTGGGAATAGCCAAGTTTTCAGTGGCCTTGTTCAGGGAAGGTAG 2004 43.11 MKFLRFLQYFVILVLSFLQILCHCSSYPTPMNCTDTSRLCTSFLAFKPQPNQTFAVLQSMFDVLPADITVEGNGHDYVFIKKNCSCSSTSKKYITNTTFTIKSNGGYVYDLVIDAYQGLASLPNTTRAARSGAVVSLRLFCGCSSGLWNYLMSYLLTEGDSIQSLASRFGVSMDSIEAVNGILNPDNVSLASLYYIPLNSVPGEPYPLDTDSPPAPPPAPAPSSENISVKQGNDKGHAPYIWIVGSLGVILVLLLLSIAVYAFLRKSSCISSTRRRRAKDPIPNSKTSHKFHVLQKPSFFCASGRYICCRSADWKQTNAESSNLQSTIPKALENSVLDVEKPMVFTYEEIFSSTDGFSDSSLLGHGTYGSVYYGLLRDQEVAVKRMTATKTKEFMSELKVLCKVHHANLVELIGYAAHEDELFLIYEYAQKGPLRNHLHDPHNKGHTSLSWVTRVQIALDAARGLEYIHEHTKKHYVHRDIKTSNILLDGAFRAKISDFGLAKLAAKTGEGETTVTKVVGTFGYLAPEYLSDGLATTKSDVYAFGVVLFEIISGKEAIIRTEGTGTKNPERRSLASIMLAALRTSPDSTSMASLKDLVDPNMMDLYPHDCLFKMGKLGKQCVEEDPILRPDMKQVVITLSQILLSSIEWEATLAGNSQVFSGLVQGR 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 45772875 45776529 + Bma010394.1 Bma13g01247 93976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma13g01247 667 PANTHER BNAA06G02020D PROTEIN 31 667 - -
Bma13g01247 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Bma13g01247 667 MobiDBLite consensus disorder prediction 206 229 - -
Bma13g01247 667 SMART LysM_2 153 197 IPR018392 -
Bma13g01247 667 SUPERFAMILY Protein kinase-like (PK-like) 339 639 IPR011009 -
Bma13g01247 667 ProSiteProfiles Protein kinase domain profile. 357 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma13g01247 667 Gene3D LysM domain 150 202 IPR036779 -
Bma13g01247 667 Gene3D Phosphorylase Kinase; domain 1 329 428 - -
Bma13g01247 667 Gene3D Transferase(Phosphotransferase) domain 1 430 653 - -
Bma13g01247 667 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 31 667 IPR044812 GO:0019199|GO:0045087
Bma13g01247 667 MobiDBLite consensus disorder prediction 207 223 - -
Bma13g01247 667 Pfam Protein tyrosine and serine/threonine kinase 362 637 IPR001245 GO:0004672|GO:0006468
Bma13g01247 667 ProSitePatterns Protein kinases ATP-binding region signature. 363 384 IPR017441 GO:0005524
Bma13g01247 667 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
Bma13g01247 667 CDD LysM 153 187 IPR018392 -
Bma13g01247 667 SMART serkin_6 357 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00346 Bma-Chr3:2591729 Bma13g01247 Bma-Chr13:45772875 7.85E-50 dispersed
Bma07g00153 Bma-Chr7:2167191 Bma13g01247 Bma-Chr13:45772875 7.35E-39 dispersed
Bma09g00351 Bma-Chr9:30326422 Bma13g01247 Bma-Chr13:45772875 9.13E-09 dispersed
Bma11g00183 Bma-Chr11:1661235 Bma13g01247 Bma-Chr13:45772875 1.69E-40 dispersed
Bma12g00080 Bma-Chr12:1468414 Bma13g01247 Bma-Chr13:45772875 2.41E-76 dispersed
Bma13g01247 Bma-Chr13:45772875 Bma15g00213 Bma-Chr15:2120393 4.34E-115 dispersed
Bma13g01247 Bma-Chr13:45772875 Bma14g00387 Bma-Chr14:4619699 1.12E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66866 PF07714 PK_Tyr_Ser-Thr 2.00E-49 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma13g01247 - - csv:101213624 976.081