Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00004 ATGGGTGCACCAAAGAAAGTTGGGTCGAGGACTTCTGACGACGTATTACTTCCGCTTGTGAATGTCCCAATGATAAATTATAGCTTAGCATGGCTTGAATCTGCAGGCGTTGAAGAAGTTTTTGTATTTTGCTGTGCTCATTCAAGGCAAGTAATTGATTATTTGGAGAATTCTGAATGGTTCTCTCAACCAGAGTTCTCGGTCACAACAATAGAATCACACAATTCTGTGAGTGCGGGAGACGCTCTGCGCTTAATCTATGAAAAGAATGTGATACATGGAGACTTTATCCTTATCACAGGAGATACAATAAGCAACATGTCACTTTCACAAGCTCTTCAGGAACACAAGGAAAGAAAGAAAAGAGATAGCAATGCAGTAATGACCATGATTATCAAACAATCGATGCCCTCTCCTATCACTCACCAATCTCGTCTTGGTACTGATGAGCTGTTTATGGCAGTAGATCCTGACACTAAGCAACTACTATATTATGAGGATAGAGCGGACCAATCAAAAGGGGCTATATATCTTGATAAGCTATTACTGATGGATAATCCTTTAATTTCTCTTCACAATGACAAACAGGATTGCTATATAGATATTTGTTCTCCAGAAGTCCTCAGTCTTTTCACAGATAACTTTGACTATCAGCATCTTCGACGCCACTTTGTCAAAGGATTGCTCGTCGATGATATCATGGGTTACAAGATCTTTACACATGATATTCACTCGAGCTATGCGGCTAGGATTGATAATTTTCGAAGCTATGATGCAATTAGCAAGGACATTATACAGAGGTGGTCATATCCATTCGTTCCAGATGTTAAATTCTTTGGAAATTCCACGACAAAACTTGAAAGACAGGGGATGTATAGAGCTTCAGATATTACGCAAGCTCGTTCTGCTCAAATAGGTTCTTCTACTGTTATCGGAAAGAACACTGAAATCAGGTGCAACACCAAAATTTCAAATTCAGTTGTTGGACAAGGATGCAAAATTGGATCCAACGTTTTGATAGAAGGTTCTTACATATGGGATAATGTTACTATCGAGGACGGCTGTAAATTAAGGCATGCAATTGTTTGCGATGGAGTGACCCTGAGATTGGGAGCTGAACTAGAACCTGGTGTAGTTTTGTCTTTCAATGTTGTTATAGGTGAACAATTTGTTGTTCCTGCATATTCAAAGGTGTCATTGTTTCAGCAACCAACCAAGCTAGATAGCGATGAGGAGCTGGAATATGCTGATAATAGCAGTGTTATTATTGAAAGTAATGATTATTACTATCTATTTTCCTTTTGGAATTTGCATGACTCTTTGAAATTGATGTCAACAAATCTTGGTACTGGTGGTGTTGGACATATATGGTCAGATTTTGAAGGAAACATTGAGGAAAGATGGAGGCACTCAGTTGCACCAATTCCTGCGGATAAAGTTGCTGAGGCAATGCAAGCCAGAGATGATGACTTTGAGTTGTCTGCTCAGATGGAGGCATTCTCCCTCCTTCAGGAGAGTGAAAACCCAGTCCAATGA 1536 39.65 MGAPKKVGSRTSDDVLLPLVNVPMINYSLAWLESAGVEEVFVFCCAHSRQVIDYLENSEWFSQPEFSVTTIESHNSVSAGDALRLIYEKNVIHGDFILITGDTISNMSLSQALQEHKERKKRDSNAVMTMIIKQSMPSPITHQSRLGTDELFMAVDPDTKQLLYYEDRADQSKGAIYLDKLLLMDNPLISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHDIHSSYAARIDNFRSYDAISKDIIQRWSYPFVPDVKFFGNSTTKLERQGMYRASDITQARSAQIGSSTVIGKNTEIRCNTKISNSVVGQGCKIGSNVLIEGSYIWDNVTIEDGCKLRHAIVCDGVTLRLGAELEPGVVLSFNVVIGEQFVVPAYSKVSLFQQPTKLDSDEELEYADNSSVIIESNDYYYLFSFWNLHDSLKLMSTNLGTGGVGHIWSDFEGNIEERWRHSVAPIPADKVAEAMQARDDDFELSAQMEAFSLLQESENPVQ 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 19179 25355 + Bma010405.1 Bma14g00004 93985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00004 511 Pfam Nucleotidyl transferase 16 135 IPR005835 GO:0009058|GO:0016779
Bma14g00004 511 SUPERFAMILY Nucleotide-diphospho-sugar transferases 15 338 IPR029044 -
Bma14g00004 511 CDD LbH_eIF2B_epsilon 310 388 - -
Bma14g00004 511 SUPERFAMILY Trimeric LpxA-like enzymes 237 399 IPR011004 -
Bma14g00004 511 Gene3D Hexapeptide repeat proteins 281 407 - -
Bma14g00004 511 CDD eIF-2B_epsilon_N 15 208 IPR035543 -
Bma14g00004 511 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 14 490 - -
Bma14g00004 511 Pfam Bacterial transferase hexapeptide (six repeats) 308 342 IPR001451 -
Bma14g00004 511 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 274 IPR029044 -
Bma14g00004 511 PANTHER - 14 490 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00403 Bma-Chr6:13811840 Bma14g00004 Bma-Chr14:19179 0 dispersed
Bma14g00004 Bma-Chr14:19179 Bma14g01282 Bma-Chr14:22698737 0 dispersed
Bma14g00004 Bma-Chr14:19179 Bma07g01203 Bma-Chr7:46800894 3.26E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00004 K03240 - qsu:112039284 778.089