Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00033 ATAATGTCATCCTCTTCTACTCCTACCTTGACTCAGCTGGACCACCTTCCTCCCTCGGAGCAGCTCTGCTACGTCCATTGCAACATATGTGACACTGTCTTAGCGGTGAGCGTTCCTTGCACCAGTTTGTTCAAGACTGTGACAGTTCGATGCGGCCATTGCACCAACCTCCTGCCAGGTCTTCTTCTTCCTTCCAACAACCAGTTTCACCAGCTGAGCCACCCTCTTTTTTCACCCTCCCATAACTTTCTGGAAGAGATTCCCAATGTAACTCCAAATTTTCTGATCAACCAGAGCATTGCAAATGATTTTGTCATGCCCTCTCGAGGGGTTATGAACGAGCTTCCAAGACCTCCAGCTATAAACAGACCTCCAGAGAAAAGACAGAGAGTTCCTTCTGCATATAATCGCTTCATCAAGGATGAGATTCAACGCATCAAGTCTGTGAATCCAGATATTTCACACAGAGAAGCGTTCAGCGCAGCTGCTAAAAATTGGGCCCACTTTCCACACATTCACTTTGGTCTCATGCCCGACCAGACAATGAAGAAGACAACCATGCGCCAACAGGAAGGAGATGATGTTTTGATGAAAGACGGGTTTTTCGCTGCAGCGAATGTGGGTATGTCCCACTTTTGA 639 47.26 IMSSSSTPTLTQLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPGLLLPSNNQFHQLSHPLFSPSHNFLEEIPNVTPNFLINQSIANDFVMPSRGVMNELPRPPAINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTTMRQQEGDDVLMKDGFFAAANVGMSHF 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 456429 458644 + Bma010441.1 Bma14g00033 94014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00033 212 PANTHER PROTEIN YABBY 4 2 210 - -
Bma14g00033 212 PANTHER PROTEIN YABBY 6-RELATED 2 210 IPR006780 GO:0007275
Bma14g00033 212 SUPERFAMILY HMG-box 121 169 IPR036910 -
Bma14g00033 212 Pfam YABBY protein 18 176 IPR006780 GO:0007275
Bma14g00033 212 Gene3D High mobility group box domain 119 186 IPR036910 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01225 Bma-Chr5:51670462 Bma14g00033 Bma-Chr14:456429 2.28E-76 transposed
Bma06g00744 Bma-Chr6:38621157 Bma14g00033 Bma-Chr14:456429 3.93E-43 transposed
Bma12g00169 Bma-Chr12:2310453 Bma14g00033 Bma-Chr14:456429 3.34E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58282 PF04690 YABBY 2.90E-65 CL0114 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00033 K25796 - jre:109011373 347.051