Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00048 ATGGTGATGGAGTTGATGAGGAGGGACGCCATTGAAGATGTACTCGTAATTGGGGGTTTGATCGGAGCTCAGATTGTATATGCAGGGAACTCTGTGCTTTTGAGTTATCTATTGGCTTTGGGCCTCAACCCTCTCTCCATTGTCGTCTTCGCTTCCTTCGCCACTTTTCTTATAGTTTCCCCCTTCGCTGTTTATTTTGAAAGGAGCAATTGGCCTCAGAAACTGGGTTTCAAATTGCTGGTTCAGCTGGTTCTCTTAGCGTTAGGAGGGGTAACTTTATTCCAATCTCTAATGCTCAAGGGTATAAACCTTACTTCGCCTGCCATGGCTACTGCTATGACAAGCCTTTCTCCTGGACTCATCTTCATCATTGCTTGGGCATTTAGATTAGAGAAAGTTAAGCTCAATTGCATTTACAGCAGAGCTAAAATCGCAGGGACAGTGTTGTGTGTAATAGGGGCTCTCACGATGAGCTTAGTTCATAGCCAAGCCACTGAACCAGAAATAGAGGCTTACCAATTAATCTTTGATAGGCAAAAGGTCATTGGCTGCTTCTGTCTCTCGCTTGGAGTCTTGATGCTGTCTTTCACCATTGTTTTGCAGGCATCGACTCTCAAAGATTTTCCCGCTCCGTTGTCTATGTGCTCGTGGACATCCTTCATCGGTGCGATCACGACTTGTAGCCTCCAGCTTTTCGAAGATCGGAGCGTTGATATGGGTTGGGCAAGGATGAGTATTGGAAAATTGATTGGCTTTTACCTACTGGTTGGGGCCGTGAATGGTGGGATCATGAGTTTCAACGGGTGGGCGATAAAGAAGAGAGGGCCGGTCATGCAGTCGGTTTTTAATCCAATTGGAGCAGTTTGCTCCATCATTCTATCAATGTTCACCATGGGAGATACCATTAAAATTGGAAGCCTTGTCGGAATGTTCATCTTGTTCTCGGGATTTTACTTGGTGCTTTGGGCAAAAGGGAAGGAAGGTGTTTCCAATGGAGATGATGGCTTGGAGGGAGAGATAGATGAAGAGAAGCCTCTCCTAAGTTAA 1047 45.56 MVMELMRRDAIEDVLVIGGLIGAQIVYAGNSVLLSYLLALGLNPLSIVVFASFATFLIVSPFAVYFERSNWPQKLGFKLLVQLVLLALGGVTLFQSLMLKGINLTSPAMATAMTSLSPGLIFIIAWAFRLEKVKLNCIYSRAKIAGTVLCVIGALTMSLVHSQATEPEIEAYQLIFDRQKVIGCFCLSLGVLMLSFTIVLQASTLKDFPAPLSMCSWTSFIGAITTCSLQLFEDRSVDMGWARMSIGKLIGFYLLVGAVNGGIMSFNGWAIKKRGPVMQSVFNPIGAVCSIILSMFTMGDTIKIGSLVGMFILFSGFYLVLWAKGKEGVSNGDDGLEGEIDEEKPLLS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 605173 606804 - Bma010455.1 Bma14g00048 94029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00048 348 Pfam EamA-like transporter family 20 158 IPR000620 GO:0016020|GO:0016021
Bma14g00048 348 Pfam EamA-like transporter family 182 321 IPR000620 GO:0016020|GO:0016021
Bma14g00048 348 PANTHER OS11G0588100 PROTEIN 14 348 - -
Bma14g00048 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Bma14g00048 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 159 - -
Bma14g00048 348 PANTHER WAT1-RELATED PROTEIN 14 348 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00755 Bma-Chr5:44089138 Bma14g00048 Bma-Chr14:605173 4.31E-133 dispersed
Bma14g00048 Bma-Chr14:605173 Bma01g01889 Bma-Chr1:69604153 1.21E-39 dispersed
Bma14g00048 Bma-Chr14:605173 Bma01g02344 Bma-Chr1:81025430 2.02E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00048 - - qsu:112028067 412.535