Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g00089 | ATGGATTTTGGGTTTGGTGAAGAGAGAGGTAAGTTACCTTTTTCATACTCCTCTTCCTCTTCCTCTCCGTCCTCTTCTTCGCAGTACAAAACAGCCAATCTGATGCCTCTAGGCAACAACGAAAGCTGGGAGTCTCGTCTTTACGACAACTACCAGCAGCAGCCGAGAGGGTTTGAGCTGATGGCTGCGAACGACGTAGAAGTAATGGAGAGGTGTGGAGATTCAGACGGCCATGGGAGTCGAGGAAGCTTTTGTATGGAGAAGGAGCACATGTTCGACAAAGTTGTCACCCCTAGCGACGTCGGAAAACTGAATCGGCTGGTAATTCCGAAACAGCACGCAGAGAAGTATTTTCCTCTTGATTCATCCACCAACGAGAAAGGTCTCCTCCTAAATTTCGAAGATCGGAATGGAAAGCCATGGCGATTCCGGTATTCCTACTGGAATAGCAGCCAAAGCTACGTTATGACAAAAGGATGGAGCCGGTTTGTCAAGGAGAAGAAGCTAGACGCAGGCGACATTGTTTCCTTCCAGCGTGGAGTTGGGGAGGCGGGAAAAGACCATCTTTATATTGACTGGCGGCGCCGCCCAGATGCGCCTGAAACAGCAGCGACGCTCGGTGGAAACATAGCACTAATTCCACACCAATTCGCATTCCACCACCACCATTCAGTCCCTTGGAGCCCTTTGCTCCTCCGCTCCATGCCGGCTGCAACGTCCTTGTCTATGCCGCGGGACCACTTGCACTTGTCGCACTTAAACAACAATGTCGTCCACAGAGGAGGTTCCGCCGTTTACGGTGGTGTGATGAACCCAAACCCAAGTCCAAATTGCTCAAACGGGTCGATTGTTTACTTCAGGTCGGCACCAGCAGGGGCACAAGCGCAGCCATTGAGGGCGGCGCAAGTTCAACAGGGAGGTGGAGTGGAGCGGATGGTGTTTGATTCAGTCCCAGTGGTCCACGGGAAAGCGGCTGCCAAGAGACTGAGGCTATTCGGAGTTAACATGGACTGCCCTATACCGGAATCCGACGGAAGCCGGGAGGCGGCGGGATCTCATCAGCTGCCTCGTCTTTCTTCTTCCAATTCCCAGTCTCCTCTTCAACTGAGGCTCTTTAACAGCACCCCAATCCCACCCCAATTTCTCAGCAACGAAAAACCTACTTCCATGTCCTTAGATTTCGACATTTGA | 1191 | 51.97 | MDFGFGEERGKLPFSYSSSSSSPSSSSQYKTANLMPLGNNESWESRLYDNYQQQPRGFELMAANDVEVMERCGDSDGHGSRGSFCMEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGEAGKDHLYIDWRRRPDAPETAATLGGNIALIPHQFAFHHHHSVPWSPLLLRSMPAATSLSMPRDHLHLSHLNNNVVHRGGSAVYGGVMNPNPSPNCSNGSIVYFRSAPAGAQAQPLRAAQVQQGGGVERMVFDSVPVVHGKAAAKRLRLFGVNMDCPIPESDGSREAAGSHQLPRLSSSNSQSPLQLRLFNSTPIPPQFLSNEKPTSMSLDFDI | 396 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 1257805 | 1258995 | - | Bma010494.1 | Bma14g00089 | 94070 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g00089 | 396 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 67 | 374 | IPR044800 | GO:0003700 | |
Bma14g00089 | 396 | Gene3D | - | 85 | 204 | IPR015300 | - | |
Bma14g00089 | 396 | MobiDBLite | consensus disorder prediction | 343 | 396 | - | - | |
Bma14g00089 | 396 | MobiDBLite | consensus disorder prediction | 353 | 390 | - | - | |
Bma14g00089 | 396 | MobiDBLite | consensus disorder prediction | 13 | 33 | - | - | |
Bma14g00089 | 396 | ProSiteProfiles | B3 DNA-binding domain profile. | 92 | 197 | IPR003340 | GO:0003677 | |
Bma14g00089 | 396 | Pfam | B3 DNA binding domain | 92 | 196 | IPR003340 | GO:0003677 | |
Bma14g00089 | 396 | SMART | B3_2 | 92 | 197 | IPR003340 | GO:0003677 | |
Bma14g00089 | 396 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Bma14g00089 | 396 | CDD | B3_DNA | 90 | 191 | IPR003340 | GO:0003677 | |
Bma14g00089 | 396 | SUPERFAMILY | DNA-binding pseudobarrel domain | 89 | 196 | IPR015300 | - | |
Bma14g00089 | 396 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 | 67 | 374 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g01046 | Bma14g00089 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00935 | Bma-Chr4:13347376 | Bma14g00089 | Bma-Chr14:1257805 | 9.53E-96 | dispersed | |
Bma05g01206 | Bma-Chr5:51476001 | Bma14g00089 | Bma-Chr14:1257805 | 1.50E-87 | dispersed | |
Bma06g01360 | Bma-Chr6:50471857 | Bma14g00089 | Bma-Chr14:1257805 | 4.56E-54 | dispersed | |
Bma10g00112 | Bma-Chr10:1056001 | Bma14g00089 | Bma-Chr14:1257805 | 1.69E-49 | dispersed | |
Bma14g00089 | Bma-Chr14:1257805 | Bma14g01697 | Bma-Chr14:36122169 | 7.84E-46 | dispersed | |
Bma14g00711 | Bma-Chr14:7769028 | Bma14g00089 | Bma-Chr14:1257805 | 1.52E-29 | transposed | |
Bma14g00089 | Bma-Chr14:1257805 | Bma07g01046 | Bma-Chr7:42169312 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58291 | PF02362 | B3 | 3.00E-29 | CL0405 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g00089 | - | - | vvi:100266710 | 386.726 |