Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00089 ATGGATTTTGGGTTTGGTGAAGAGAGAGGTAAGTTACCTTTTTCATACTCCTCTTCCTCTTCCTCTCCGTCCTCTTCTTCGCAGTACAAAACAGCCAATCTGATGCCTCTAGGCAACAACGAAAGCTGGGAGTCTCGTCTTTACGACAACTACCAGCAGCAGCCGAGAGGGTTTGAGCTGATGGCTGCGAACGACGTAGAAGTAATGGAGAGGTGTGGAGATTCAGACGGCCATGGGAGTCGAGGAAGCTTTTGTATGGAGAAGGAGCACATGTTCGACAAAGTTGTCACCCCTAGCGACGTCGGAAAACTGAATCGGCTGGTAATTCCGAAACAGCACGCAGAGAAGTATTTTCCTCTTGATTCATCCACCAACGAGAAAGGTCTCCTCCTAAATTTCGAAGATCGGAATGGAAAGCCATGGCGATTCCGGTATTCCTACTGGAATAGCAGCCAAAGCTACGTTATGACAAAAGGATGGAGCCGGTTTGTCAAGGAGAAGAAGCTAGACGCAGGCGACATTGTTTCCTTCCAGCGTGGAGTTGGGGAGGCGGGAAAAGACCATCTTTATATTGACTGGCGGCGCCGCCCAGATGCGCCTGAAACAGCAGCGACGCTCGGTGGAAACATAGCACTAATTCCACACCAATTCGCATTCCACCACCACCATTCAGTCCCTTGGAGCCCTTTGCTCCTCCGCTCCATGCCGGCTGCAACGTCCTTGTCTATGCCGCGGGACCACTTGCACTTGTCGCACTTAAACAACAATGTCGTCCACAGAGGAGGTTCCGCCGTTTACGGTGGTGTGATGAACCCAAACCCAAGTCCAAATTGCTCAAACGGGTCGATTGTTTACTTCAGGTCGGCACCAGCAGGGGCACAAGCGCAGCCATTGAGGGCGGCGCAAGTTCAACAGGGAGGTGGAGTGGAGCGGATGGTGTTTGATTCAGTCCCAGTGGTCCACGGGAAAGCGGCTGCCAAGAGACTGAGGCTATTCGGAGTTAACATGGACTGCCCTATACCGGAATCCGACGGAAGCCGGGAGGCGGCGGGATCTCATCAGCTGCCTCGTCTTTCTTCTTCCAATTCCCAGTCTCCTCTTCAACTGAGGCTCTTTAACAGCACCCCAATCCCACCCCAATTTCTCAGCAACGAAAAACCTACTTCCATGTCCTTAGATTTCGACATTTGA 1191 51.97 MDFGFGEERGKLPFSYSSSSSSPSSSSQYKTANLMPLGNNESWESRLYDNYQQQPRGFELMAANDVEVMERCGDSDGHGSRGSFCMEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGEAGKDHLYIDWRRRPDAPETAATLGGNIALIPHQFAFHHHHSVPWSPLLLRSMPAATSLSMPRDHLHLSHLNNNVVHRGGSAVYGGVMNPNPSPNCSNGSIVYFRSAPAGAQAQPLRAAQVQQGGGVERMVFDSVPVVHGKAAAKRLRLFGVNMDCPIPESDGSREAAGSHQLPRLSSSNSQSPLQLRLFNSTPIPPQFLSNEKPTSMSLDFDI 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1257805 1258995 - Bma010494.1 Bma14g00089 94070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00089 396 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 67 374 IPR044800 GO:0003700
Bma14g00089 396 Gene3D - 85 204 IPR015300 -
Bma14g00089 396 MobiDBLite consensus disorder prediction 343 396 - -
Bma14g00089 396 MobiDBLite consensus disorder prediction 353 390 - -
Bma14g00089 396 MobiDBLite consensus disorder prediction 13 33 - -
Bma14g00089 396 ProSiteProfiles B3 DNA-binding domain profile. 92 197 IPR003340 GO:0003677
Bma14g00089 396 Pfam B3 DNA binding domain 92 196 IPR003340 GO:0003677
Bma14g00089 396 SMART B3_2 92 197 IPR003340 GO:0003677
Bma14g00089 396 MobiDBLite consensus disorder prediction 1 33 - -
Bma14g00089 396 CDD B3_DNA 90 191 IPR003340 GO:0003677
Bma14g00089 396 SUPERFAMILY DNA-binding pseudobarrel domain 89 196 IPR015300 -
Bma14g00089 396 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 67 374 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01046 Bma14g00089 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00935 Bma-Chr4:13347376 Bma14g00089 Bma-Chr14:1257805 9.53E-96 dispersed
Bma05g01206 Bma-Chr5:51476001 Bma14g00089 Bma-Chr14:1257805 1.50E-87 dispersed
Bma06g01360 Bma-Chr6:50471857 Bma14g00089 Bma-Chr14:1257805 4.56E-54 dispersed
Bma10g00112 Bma-Chr10:1056001 Bma14g00089 Bma-Chr14:1257805 1.69E-49 dispersed
Bma14g00089 Bma-Chr14:1257805 Bma14g01697 Bma-Chr14:36122169 7.84E-46 dispersed
Bma14g00711 Bma-Chr14:7769028 Bma14g00089 Bma-Chr14:1257805 1.52E-29 transposed
Bma14g00089 Bma-Chr14:1257805 Bma07g01046 Bma-Chr7:42169312 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58291 PF02362 B3 3.00E-29 CL0405 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00089 - - vvi:100266710 386.726