Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00091 CAGGTGAAGAACCATGGAGTGCCGGAAGAGATGATCGGGAACATGCTGGATTTGGCGAGGGAGTTTTTCCGGTTACCGAAGAGCGAAAGGATGAAGAGTTACTCCGACGACCCGAGGAAGACAACAAGGCTTTCGACCAGTTTTAACGTCAAGACGGAGAAGGTGTCGAATTGGAGAGATTTTCTGCGACTCCATTGTTACCCTCTGGAAGACTATGTTCATGAATGGCCCTCAAACCCTCCCTCTTTCCGAAAGGAAGTGGCGGAGTACTGCACCAGCGTGAGAGGACTGGTGCAGAGACTGCTGGAAGCCATGTCGGAGAGCTTGGATCTGGAAAGAGAGTTCATATGGAAGACGGCGATCGGAAAACATGGGCAGCACATGGCGATTAACTACTATCCGTCCTGCCCTCAGCCGGAGCTCACCTACGGCCTACCGTCCCACACCGACCCAAACCTCATCACCGTCCTCCTCCAAGACCATGTGCCTGGTTTACAAGTTTACAGAAATGGAAAGTGGGTAGCTGTCAATCCCGTTCCCAACACCTTCATTGTCAACATCGGCGATCAAATGCAGGTTCTGAGCAACGATGCGTACAAAAGTGTTCTTCATCGGGCCGTCGTTAATAGCCGCGTCGAACGGATATCCATCCCGACGTTCTACTGTCCGTCTCCAGATGCACTGATCGGTCCGGCAAAGGGCATGATAGATGATGACCGGCCGGCGGTTTATCGAGATTTTACGTATGCCGAATACTACGAGAAATTCTGGAACAGCGGACTCGAATCTCAATGTTGTTTGGATATGTTCAAAGTTGTAAGAGATCGTAAGGATGATAGAGAAAATATTTGA 852 50.23 QVKNHGVPEEMIGNMLDLAREFFRLPKSERMKSYSDDPRKTTRLSTSFNVKTEKVSNWRDFLRLHCYPLEDYVHEWPSNPPSFRKEVAEYCTSVRGLVQRLLEAMSESLDLEREFIWKTAIGKHGQHMAINYYPSCPQPELTYGLPSHTDPNLITVLLQDHVPGLQVYRNGKWVAVNPVPNTFIVNIGDQMQVLSNDAYKSVLHRAVVNSRVERISIPTFYCPSPDALIGPAKGMIDDDRPAVYRDFTYAEYYEKFWNSGLESQCCLDMFKVVRDRKDDRENI 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1281302 1282342 + Bma010496.1 Bma14g00091 94072

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00091 283 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 267 - -
Bma14g00091 283 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 2 267 - -
Bma14g00091 283 Pfam non-haem dioxygenase in morphine synthesis N-terminal 1 78 IPR026992 -
Bma14g00091 283 PRINTS Isopenicillin N synthase signature 183 209 - -
Bma14g00091 283 PRINTS Isopenicillin N synthase signature 148 169 - -
Bma14g00091 283 SUPERFAMILY Clavaminate synthase-like 1 260 - -
Bma14g00091 283 Gene3D - 1 260 IPR027443 -
Bma14g00091 283 Pfam 2OG-Fe(II) oxygenase superfamily 126 223 IPR044861 -
Bma14g00091 283 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 123 223 IPR005123 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00091 K24028 DMR6, DLO; salicylic acid 3-hydroxylase [EC:1.14.11.-] - pop:7489074 481.1
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00371 Bma-Chr12:6970411 Bma14g00091 Bma-Chr14:1281302 4.90E-69 dispersed
Bma14g00091 Bma-Chr14:1281302 Bma14g02031 Bma-Chr14:43609166 2.86E-119 dispersed
Bma14g00091 Bma-Chr14:1281302 Bma04g00717 Bma-Chr4:7323605 1.09E-62 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g273 . . Bda06g01122 . . . . Bma14g00091 . . . . . . . Cpe14g01023 . . . . . . . . Cla10g00077 Cam10g0075 Cec10g0077 Cco10g0081 Clacu10g0075 Cmu10g0921 Cre10g0338 Cone8ag0582 . . . . Csa05g00148 . Cme06g02383 Blo03g00791 . . . . . . . . . . . . . Car16g01165 . . . . . . . . . . . . . . . . Lsi09g00122 . . .
Vvi2g595 . . . . . . . Bma14g00091 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cmo19g00258 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007284 0 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 0 1 1 1 1 3 2 1 1 1 1 3 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00091 Bma_Chr14 FPKM 14.332344 13.992076 16.68375 16.930601 18.92827 17.808378 18.343046 24.833054 24.948271 22.942181