Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00113 ATGGATTTCTTTCTCAATGGAATTAATGTTGACACATCGGGGAGCCCCTTTGATGAAAATGACATTCAGAGATGTCCTTTTCTTCAGAACATCAATAAACCAACTTGCTTTTCATTCTCTTCTATGAATTTCTCTCTTCCTGTAAGGGGAGCTAGAGGTCCAATTTTTGAGGATGGCCCTGGTTTTAACATGGCTTTTAAATTGTTTCATGGAAAAGAAAGTTCAGCGAAACATGAGGCGATGGGAGATGAATGGTTAAAGACAGGAAACTGCCCTATTGCTAAGTCTTTTAGAGCTGCGAGGCAAGTACTTCCACTTGTTGCATCAGTAATCAAACCACCACCTGGTATGAAATTTAAATGCCCACCTGCAATAATTGCGGCAAGGGCGGCCCTGGCCAAGACTGCACTTGTAAAAAATTTGCGTCCTCAGCCATTACCTGCAAAAATGTTGGTGATTGCTATGTTAGGAATGGCTGTTAATGTTCCATTGGGAGTATGGAGGGAGCATACTAAGAAGTTCTCAGTATCATGGTTTGCTGCAGTTCATGCAGCTGTTCCTTTCATTGCCATGCTTAGAAAGTCTGTGTTGATTCCCAAAACAGCAATGGCATTGACTATAGCCGCATCTATATTAGGACAGGTTATTGGCTCTCGAGCTGAGCGATTCCGTTTGAAAGCAGTTGCTGAAAATGATCAGGTTATTGCACAAAGAGAGAGTACAATTTCCGTTCCAAACTTCGGCAATTTTAATGGTGTAGGCGGTCAGTGTGGTGCGGCGGGAATTGGTTTTGATCCTCTGTCTAATAAGGGCCATGGATCTAGTTCTTCACCTGCAGGTATATGTTTCTGA 852 42.61 MDFFLNGINVDTSGSPFDENDIQRCPFLQNINKPTCFSFSSMNFSLPVRGARGPIFEDGPGFNMAFKLFHGKESSAKHEAMGDEWLKTGNCPIAKSFRAARQVLPLVASVIKPPPGMKFKCPPAIIAARAALAKTALVKNLRPQPLPAKMLVIAMLGMAVNVPLGVWREHTKKFSVSWFAAVHAAVPFIAMLRKSVLIPKTAMALTIAASILGQVIGSRAERFRLKAVAENDQVIAQRESTISVPNFGNFNGVGGQCGAAGIGFDPLSNKGHGSSSSPAGICF 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1498994 1500544 + Bma010518.1 Bma14g00113 94094

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00113 283 PANTHER PROTEIN, PUTATIVE-RELATED 1 73 - -
Bma14g00113 283 PANTHER PROTEIN, PUTATIVE-RELATED 73 271 - -
Bma14g00113 283 PANTHER PROTEIN, PUTATIVE-RELATED 73 271 - -
Bma14g00113 283 PANTHER PROTEIN, PUTATIVE-RELATED 1 73 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00113 - - - zju:107430977 323.553
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00083 Bma-Chr3:661653 Bma14g00113 Bma-Chr14:1498994 3.30E-20 dispersed
Bma14g00113 Bma-Chr14:1498994 Bma08g01147 Bma-Chr8:50520661 2.20E-18 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g885 . . . . . . . Bma14g00113 . Cmo16g01259 . . . . . Cpe14g01002 . . . . . . . . Cla10g00109 Cam10g0104 Cec10g0111 Cco10g0113 Clacu10g0108 Cmu10g0956 Cre10g0367 . . . . Lsi07g01138 . . Cme06g02414 Blo03g00842 . Bda07g00137 . . . . . . . . . Cma16g01214 . Car16g01141 . . . . . . . . . . . . . . . . . Csa03g00108 Chy06g02197 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011057 1 3 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 3 1 0 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00113 Bma_Chr14 FPKM 5.847222 4.951141 10.81633 8.320671 3.246967 3.588719 5.570375 5.593183 8.876977 12.397574