Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00146 ATGGATCTACGCGAAGTTCCGCCTCCGCCACCTTCTGCAGCATCAAATATGATGGTTGGAGTTGGACCCAACCCGTACTCCACTTCCATGTCTAACTCGAATAATGCTATGATGGGCCATAATTCGACTGCAGCTCACATGATGTCTCCCGCTTCTCGGTTTCCGTTCAACTCTGTGATCAGTCCTGTGTCGAAGCCTTTAGATTCGCAAAGTCCTAGTCTTTTTGAAGGATCGCCGCCGGGATTGCGTACCGGTGGGTTCAACATTGAGACGGAGAAGAAAAAGAGGGGACGACCTAGGAAGTACTCGCCGGACGGTAACATTGCTTTGGGATTGTCGCCTACTCCAGTGGGTCAGGGGAATTCGAGTGGCACTCCATTTTCGGAGCCACCGGCGAAGAAGAACAGAGGCAGGCCGCCCGGCTCCGGAAAGAAGCAAATGGACGCTTTGGGTAGGACGGGTGGAGTTGGTTTTACTCCCCATGTTATCCTGGTGAATCCTGGAGAGGTATTATTTTCTTACAAGTTTAAATTTTTTGAAACCAGAAAATATACGTCTGGTAAGTCTATTTTATTGTTTCAGGATATAGCATCTAAAATCATGGCCTTTTCCGAGCAAGGTCCAAGAACCATCTGTGTTCTCTCCGCGTACGGTGCAGTCTGCAATGTCACACTTTGTCAACCTGCTTCTTCTGGTGGGTCTATGAGCTATGAGGGGAAATATGAACTTATTTCTCTTTCGGGTTCCTACTTGTTTGCTGAAAATCATGGTAGTCGGAGGCGGTCCGGTGGCCTGAGTGTCATCCTGGCCGGAGCAGATGGTCGAGTTCTTGGCGGTGGAGTTACCGGAATATTACTGGCTGCAACTCAAGTACAGGTTATTCTGGGGAGCTTTATGGTGGATGAGAAAAAAAGGAACTCAAATATCCTGAAATCTAGCTCAACTTCCACACCACCCCAGATGCTAAACTTTGGCACATCGGCCGCCAGCCCATCCTCACAAATGGCCTCCAGTGATTCATCTGACGAAAATCCGAGCAGCCCTCTCAACCACCCAGTCATTTACAACAACGCCACCCAACCGAACCAAAATAACCTGCAGATGTATCGATTATGGGCTGACCAAACACAACACTAA 1137 48.72 MDLREVPPPPPSAASNMMVGVGPNPYSTSMSNSNNAMMGHNSTAAHMMSPASRFPFNSVISPVSKPLDSQSPSLFEGSPPGLRTGGFNIETEKKKRGRPRKYSPDGNIALGLSPTPVGQGNSSGTPFSEPPAKKNRGRPPGSGKKQMDALGRTGGVGFTPHVILVNPGEVLFSYKFKFFETRKYTSGKSILLFQDIASKIMAFSEQGPRTICVLSAYGAVCNVTLCQPASSGGSMSYEGKYELISLSGSYLFAENHGSRRRSGGLSVILAGADGRVLGGGVTGILLAATQVQVILGSFMVDEKKRNSNILKSSSTSTPPQMLNFGTSAASPSSQMASSDSSDENPSSPLNHPVIYNNATQPNQNNLQMYRLWADQTQH 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2071090 2074811 - Bma010552.2 Bma14g00146 94127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00146 378 ProSiteProfiles PPC domain profile profile. 180 319 IPR005175 -
Bma14g00146 378 SUPERFAMILY AF0104/ALDC/Ptd012-like 194 299 - -
Bma14g00146 378 MobiDBLite consensus disorder prediction 114 129 - -
Bma14g00146 378 Pfam Plants and Prokaryotes Conserved (PCC) domain 194 298 IPR005175 -
Bma14g00146 378 MobiDBLite consensus disorder prediction 65 148 - -
Bma14g00146 378 MobiDBLite consensus disorder prediction 309 360 - -
Bma14g00146 378 CDD DUF296 159 298 IPR005175 -
Bma14g00146 378 Gene3D - 194 314 - -
Bma14g00146 378 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 38 346 IPR039605 GO:0003680
Bma14g00146 378 SMART AT_hook_2 93 105 IPR017956 GO:0003677
Bma14g00146 378 SMART AT_hook_2 133 145 IPR017956 GO:0003677
Bma14g00146 378 MobiDBLite consensus disorder prediction 88 102 - -
Bma14g00146 378 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 38 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g01151 Bma-Chr12:43984444 Bma14g00146 Bma-Chr14:2071090 1.00E-48 dispersed
Bma14g00146 Bma-Chr14:2071090 Bma14g00567 Bma-Chr14:6073947 1.19E-46 dispersed
Bma14g00146 Bma-Chr14:2071090 Bma14g00147 Bma-Chr14:2089797 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00146 - - zju:107430497 380.948