Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00153 ATGAATCTATGGACGGACGAGAATGGGTCGGTGATGGACGCCTTCTTGAATTCTGATCTTTCTTCTTTCTGGGCTCCGCCATCTCAGAACCAGCCTTCTTCCGCCTCTACATCTGCTCCTCTCTCCCAATCCCAGCCGTCTGCGGTGGTTTTCTCCCAGGAGAGCCTGCAGCAACGTCTGCAGGCGGTGATCGAGGGAGCTCGCGAGAGCTGGACGTACGCGATATTCTGGCAGCCCTCTTACGAATACTCCGGCCCGTCGATTTTAGGGTGGGGTGATGGGTATTACAAAGGAGATGAAGGAAAGGGAGCGGCCAGACCTAATGCTCCCACTTCTGCTGCGGAGCAGGAGCACCGGAGAAAAGTTCTTCGGGAGCTCAACTCACTGATTTCAGGCTCCGCCGCCGCTTCAGACGACCCTGTCGATGAAGTCGTCACCGACACCGAGTGGTTCTTCTTGGTTTCGATGACCCAATCTTTCGTCAACGGCAGTGGATTGCCCGGTCAGGCTTTGTTCAGTTCCCGACCGGTGTGGGTTTCAGGCCCTGACCGACTGGCGACGTCTACCTGCGAACGGGCTCGGCAGGCTCAGGCCTTCGGGTTGCAGACGATAGTATGTATACCCTCTCCTAACGGAGTGGTTGAATTGGGGTCGACGGAGGTCATTTTGCAGAGCGCCGATTTGACGAATAAAGTAAGGGTTTTGTTCAATTTCAATAATCTGGAAGTTGGTTCGTGGCCCTTGGACAGTGCTGACCAAGCCGAAATGGACCCATCTTCTCTCTGGCTGAACGATCCATCTGAAATTAAGGAACCGGCGAGCTCAATCCCATCTTCAATGGCTCCAGTCTCAACTACACAGGAAGCTTCAAAGCCAATCCACATCGAAAATCGAAGGTCATCGGAGAATCCATCCAACCCACATTCGCCTCGGATGCAGACGCAGACCTTCTTCGCCAGAGAATTGAATTTCTCCAGCTCCGGATGCAAACCGGAATCCGGCGAGATTCTTAACTTCGGTGAAAGTAAAAGGAGTTCTTATGAAAACGGCAGCTTGTTCTCCGCCCATTCTCAGATCATTCCTGAGGAGCCCGTGAAGAAGAAGAGATCGCCTGGTTCTCGGGGAAGTAACGACGATGGGATGTTGTCGTTTACTTCCGGCGTGAAATCAAGTGGATGCGGACTGGAATCAGACCATTCCGATATCGAAGCTTCAGTGGTTCGTGAAGCAGACAGTAGCAGAGTAGTAGAACCAGAGAAGAAGCCTCGAAAACGAGGAAGAAAACCAGCAAACGGAAGAGAAGAGCCATTAAATCACGTCGAAGCAGAACGACAGAGAAGAGAGAAGCTAAACCAGAAATTCTACGCTCTCAGAGCTGTAGTTCCAAACGTGTCGAAAATGGACAAAGCTTCCCTTCTCGGCGACGCCATTTCTTACATCAACGAGCTCAAATCCAAGCTTCAAACTTCAGAATCAGAAAACGAAGAATTGCAGGCACAGTTAGATTCATCAAAAAAGGATTTGGCCAGCAAAGAAAATCGCTACCCAAGATCAAAACAAGATCAAGAACAGAAGATATCAAACCAAAATGGAGGTAAACTTTCCGAAATGGACATTGATGTAAAAATTCTGGGTTGGGACGCCATGATCCGAATTCAATGCAGTAAGAAAAACCATCCAGCTGCTGCGTTAATGGCGGCTCTAAAGGAATTACACTTGGAAGTTCACCATGCGAGCATGTCAGTAGTGAATAACTTCATGATCCAACAAGCGACAGTGAAGATGGGAAGTAGATTTTACACTCAAGAACAGCTCAAAAATGCTCTGTCGTCAAAATTAAGCGATACCTGA 1851 49.38 MNLWTDENGSVMDAFLNSDLSSFWAPPSQNQPSSASTSAPLSQSQPSAVVFSQESLQQRLQAVIEGARESWTYAIFWQPSYEYSGPSILGWGDGYYKGDEGKGAARPNAPTSAAEQEHRRKVLRELNSLISGSAAASDDPVDEVVTDTEWFFLVSMTQSFVNGSGLPGQALFSSRPVWVSGPDRLATSTCERARQAQAFGLQTIVCIPSPNGVVELGSTEVILQSADLTNKVRVLFNFNNLEVGSWPLDSADQAEMDPSSLWLNDPSEIKEPASSIPSSMAPVSTTQEASKPIHIENRRSSENPSNPHSPRMQTQTFFARELNFSSSGCKPESGEILNFGESKRSSYENGSLFSAHSQIIPEEPVKKKRSPGSRGSNDDGMLSFTSGVKSSGCGLESDHSDIEASVVREADSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQTSESENEELQAQLDSSKKDLASKENRYPRSKQDQEQKISNQNGGKLSEMDIDVKILGWDAMIRIQCSKKNHPAAALMAALKELHLEVHHASMSVVNNFMIQQATVKMGSRFYTQEQLKNALSSKLSDT 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2131378 2133228 - Bma010560.1 Bma14g00153 94134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00153 616 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 434 483 IPR011598 GO:0046983
Bma14g00153 616 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 56 236 IPR025610 -
Bma14g00153 616 MobiDBLite consensus disorder prediction 376 393 - -
Bma14g00153 616 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 437 502 IPR036638 GO:0046983
Bma14g00153 616 SMART finulus 440 489 IPR011598 GO:0046983
Bma14g00153 616 MobiDBLite consensus disorder prediction 257 312 - -
Bma14g00153 616 MobiDBLite consensus disorder prediction 401 444 - -
Bma14g00153 616 MobiDBLite consensus disorder prediction 354 444 - -
Bma14g00153 616 Pfam Helix-loop-helix DNA-binding domain 438 483 IPR011598 GO:0046983
Bma14g00153 616 Coils Coil 480 514 - -
Bma14g00153 616 Gene3D - 433 508 IPR036638 GO:0046983
Bma14g00153 616 PANTHER TRANSCRIPTION FACTOR MYC2 43 613 - -
Bma14g00153 616 MobiDBLite consensus disorder prediction 487 532 - -
Bma14g00153 616 CDD bHLH_AtAIB_like 431 506 - -
Bma14g00153 616 MobiDBLite consensus disorder prediction 271 291 - -
Bma14g00153 616 PANTHER MYC 43 613 IPR045084 GO:0003700|GO:0006355
Bma14g00153 616 MobiDBLite consensus disorder prediction 498 521 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00930 Bma14g00153 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00924 Bma-Chr4:12939830 Bma14g00153 Bma-Chr14:2131378 1.40E-32 dispersed
Bma04g01462 Bma-Chr4:50328482 Bma14g00153 Bma-Chr14:2131378 7.47E-07 dispersed
Bma05g01198 Bma-Chr5:51255363 Bma14g00153 Bma-Chr14:2131378 2.91E-31 dispersed
Bma07g01022 Bma-Chr7:40965753 Bma14g00153 Bma-Chr14:2131378 1.97E-42 dispersed
Bma10g00424 Bma-Chr10:4463780 Bma14g00153 Bma-Chr14:2131378 1.01E-37 dispersed
Bma11g00703 Bma-Chr11:16745683 Bma14g00153 Bma-Chr14:2131378 3.99E-20 dispersed
Bma11g00704 Bma-Chr11:16988076 Bma14g00153 Bma-Chr14:2131378 2.30E-19 dispersed
Bma14g01286 Bma-Chr14:23293160 Bma14g00153 Bma-Chr14:2131378 1.71E-14 dispersed
Bma15g01092 Bma-Chr15:43505440 Bma14g00153 Bma-Chr14:2131378 7.43E-18 dispersed
Bma05g00957 Bma-Chr5:47819409 Bma14g00153 Bma-Chr14:2131378 4.52E-06 transposed
Bma10g01010 Bma-Chr10:24745379 Bma14g00153 Bma-Chr14:2131378 8.61E-09 transposed
Bma12g00073 Bma-Chr12:1284561 Bma14g00153 Bma-Chr14:2131378 2.75E-23 transposed
Bma12g00210 Bma-Chr12:2755073 Bma14g00153 Bma-Chr14:2131378 1.08E-87 transposed
Bma14g00153 Bma-Chr14:2131378 Bma07g00930 Bma-Chr7:34124281 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58294 PF14215 bHLH-MYC_N 1.20E-54 CL0161 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00153 K13422 - vvi:100250607 795.423