Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00165 AAGACGATAATGGCGAATGCGCTCCCCGAAAGGGTGAAGAAGGCGTGGGAGAGATGGAATATTAGATCCATCATCCTGCTCAGCCTTTCCTTGCAAATTATTTTGATCTTCGGTGCTCCTTTCAGAAAACGAACTTCCAGAACCTTCATCATCTTCCTAATCTGGTCTTCTTACTTGCTCGCAGATTGGGCCGCGAGCTTTGTCGTCGGCCTAATCTCCAATGCGCAGGAAAAGCCTTCCACCTCCGACAACACTGAACATCTCCTCGCGTTTTGGGCTCCTTTTCTCCTTCTACACCTCGGCGGTCCCGACACCATTACCGCCTTTGCTTTGGAAGATAACGCTCTCTGGCTCAGGCACTTGATCGGACTTCTCTTCCAGGTTATCGCTACGGCATATGTCTTCCTTCAAACGATCCCGAACAACAACCTATGGCGGCCGACCGTCTTTATGTTTCTCGCCGGAATCTCCAAGTACGCTGAGCGGACTCGCGCTTTGTACCTTGCGAGCTTGGGGAGATTCAGAGAGTCCATGCTCAAAGCTCCGGATCCGGGCCCTAATTACGCTAAGCTAATGGAGGAATACTGGTCGAAGAAAGAGGACAGACTTCCGACTCGAATCGAACTGACGGCGCAGCCTGAGGACAAAAAACAGAGAGTCGCCATGAGCTCCGTCGTCGAAGGCGAATTGAGTGATTTTCAGGTGGTCCATCATGCATATCGCTACTACAACATTTTCAAGGGCTTAATTGTAGATATAATCTTCAGCTTTCGCGAGCGGGACGAGAGCCGCGAGTTTTTCCATCGGCGAACCGCTGAAGATGCTTTCAAGGTTATCGTGTTCGAGCTCAATTTCATCTATGAAGCTCTATTTACCAAGGTCGTTGTTCTGCACAATGTCTTTGGTTATATCTTCCGGCTCTTCTCTTTCATCGCTGTTTTAGTTGCTTCAGTCCTCTTCTGGAAAATAGACAAGACTTTCGAGAACGTGGACATCAGGATCACCTACACTTTACTAATCGGTGCTATAGCCTTGGATTTAGTATCTCTTTTAATGGCCGTGTTCTCGGATTGGACCGTAGCCAATGTCAGGAGGGAGAAATCACGGCGAGCTGCCTTTTTCACTCTCTTCCTCAGCTGCAAGATGCCCCAATGGACGAGATCCAATCCTTCCACTGAAGATCGTGAGTTGAAGACGCCACTACCCCTGAGGAGGTGGTCGGAATCTTTGGCTCAGTTCAATCTGATCGAATATTGCCTCAGAGAACGTTCGATTAGATACTACGACGACAGCGACAAATCCAGAAACAAAATCCTTCGCTATATTCGCAGTCTCTGCTGGAAATGGGTTCTACCAACGATCGATAGAATTTCCTTCTACATTGGAACCAAGGATCTACTAGACTACTGGTTGTACGTGTCCAGGAAGCCATTTAAGCTAAAGTTATGGAAGCTCATCTTCGACGAGCTCCTGAAGAAATCAAAAGCGGCAGAAGATGCAGAAACCACAACAACAATATGCTCAGCAAGAGGAAGTTACGCTCTGGAAGAAGGTAAATGGAGCATCAACGTTAACAAACTAGTTCTTCCATATTTGGACGAATTAGAGTTCGACGAGAGCCTCCTTATATGGCACATAGCTACAGAGCTCTGCTACAGAAATGCCGGAAAAAATGAAGCCGCAGAAAACAAAGAGTTCAGCAAAATCTTGTCCGATTACATGCTTTATCTTCTGGTTATGCAGCCGACTCTAATGTCGGCAGTAGCCGGAATCGGACAGATAAGATTCAGGGACACCTGCGCAGAGGCCAAAAAGTTCTTCGACAGAAGAGGATTGGGGACGACAATGGTGAAAGAAGCATGCGAATATATACTCAATGTGAACACAGATGTAAAGCCGGTGACTGTGAAAGGAGATAGAAGTAAATCTGTGTTGTTCGAGGCAGCCACGCTCGCGAAGGAACTGAACGCAATGAGGGAGGACGAGAAGTGGAGGCTGATATGTGTGGTTTGGGTAGAGATTTTGGGATATGCAGCAAACCATTGTAGAGCAGACAGCCATGCTCAACTGGTTGCTAAAGGGGGAGAATTTCTGACCTTCGTTTGGCTGTTAATGGCGCATTTTGGGCTGGGAGAACAATTTCAGATCAACGAAGGACACGCCAGAGCTAAACTTATCGTTGGAAAGTAG 2190 47.35 KTIMANALPERVKKAWERWNIRSIILLSLSLQIILIFGAPFRKRTSRTFIIFLIWSSYLLADWAASFVVGLISNAQEKPSTSDNTEHLLAFWAPFLLLHLGGPDTITAFALEDNALWLRHLIGLLFQVIATAYVFLQTIPNNNLWRPTVFMFLAGISKYAERTRALYLASLGRFRESMLKAPDPGPNYAKLMEEYWSKKEDRLPTRIELTAQPEDKKQRVAMSSVVEGELSDFQVVHHAYRYYNIFKGLIVDIIFSFRERDESREFFHRRTAEDAFKVIVFELNFIYEALFTKVVVLHNVFGYIFRLFSFIAVLVASVLFWKIDKTFENVDIRITYTLLIGAIALDLVSLLMAVFSDWTVANVRREKSRRAAFFTLFLSCKMPQWTRSNPSTEDRELKTPLPLRRWSESLAQFNLIEYCLRERSIRYYDDSDKSRNKILRYIRSLCWKWVLPTIDRISFYIGTKDLLDYWLYVSRKPFKLKLWKLIFDELLKKSKAAEDAETTTTICSARGSYALEEGKWSINVNKLVLPYLDELEFDESLLIWHIATELCYRNAGKNEAAENKEFSKILSDYMLYLLVMQPTLMSAVAGIGQIRFRDTCAEAKKFFDRRGLGTTMVKEACEYILNVNTDVKPVTVKGDRSKSVLFEAATLAKELNAMREDEKWRLICVVWVEILGYAANHCRADSHAQLVAKGGEFLTFVWLLMAHFGLGEQFQINEGHARAKLIVGK 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2223990 2226179 + Bma010572.1 Bma14g00165 94146

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00165 729 PANTHER OS01G0798800 PROTEIN-RELATED 6 715 - -
Bma14g00165 729 Pfam Domain of unknown function (DUF4220) 55 418 IPR025315 -
Bma14g00165 729 PANTHER PROTEIN, PUTATIVE (DUF594)-RELATED 6 715 - -
Bma14g00165 729 Pfam Protein of unknown function, DUF594 659 710 IPR007658 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00165 - - - cmax:111491457 818.535
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00339 Bma-Chr1:2775932 Bma14g00165 Bma-Chr14:2223990 5.37E-50 dispersed
Bma01g00340 Bma-Chr1:2802062 Bma14g00165 Bma-Chr14:2223990 4.68E-55 dispersed
Bma14g00165 Bma-Chr14:2223990 Bma14g00636 Bma-Chr14:6832356 0 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g308 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma14g00165 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006398 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 2 1 2 1 6 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00165 Bma_Chr14 FPKM 53.091228 60.265881 48.613266 45.730824 5.321813 3.773203 3.916099 25.129808 23.322668 25.558208