Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00176 ATGTTTTTCTTGGTAGTTTTTGGTGGAATTCTGATGGGTTTCGCGAAACACAATGTTCATAGTGAGAAGTATATAAGTTGGGATGATTTGAAGGTGGATAAAATGGAGAGAACAAGTTCAGCTTACCAGAATAATCAAAGTCGAGTTATCGTTGTCGATGAGCATGGCAGAGGAGATTCTGTTACAGTTCAAGGAGCTGTTGATATGGTTCCTGAACAAAATACAAAAAGAGTAAAAATTTACATTCGTCCGGGAATTTACAGAGAGAAGGTTCTTGTTCCAAGAAACAAACCATATATCTCCTTCATAGGCGATGACAATCAAGCTTCCAACACTGTAATTTCATGGAACAACAAAGCATCTGACAAAGACAAACATGGGAACAATCTCGGAACATACGGATCAGCATCTGCGTCGATCGAATCAGATTACTTTTGCGCAATGGGGATTACTTTCCAGAACACAATAAAGATAGAACCCAAAGGAGTTGGAAGGCAAGCAGTTGCACTGAGAATAGCAGGAGACAAGGCAATGTTCTATAAAGTAAGAATCGTGGGAGATCAAGACACTCTTCTAGATGAATCTGGGACACACTATTTCTACAATTGTCACATTCAAGGAAGTGTAGATTTCATATTTGGAAGATCTAAATCGTTATACGAGTACAATAATCTTTTTTTTTTTCTGACCTGTTATTTGTCGAGCCTCCAGCGTTGCATGCTTAGATCAACAGCTAAGAAATACGGATCCATCGCAGCTCATCACAGGGATTCATCCGATGAAGATACAGGATTCTCCTTCGTTCGGTGCAGAATCGAAGGAACCGGCAATGTTCTTCTGGGAAGAGCATGGGGGAACTATTCTCGAGCAATCTATTCTTACTGCTCTATGGCAGACATTATAAACCCTCAAGGCTGGAGCGACTGGAACTACCCATCAAGACAAAGGACTGCTGTATTTGGAGAGTACAAATGCAGAGGCAAAGGAGCTAATACACGAGGAAGAGTGTCGTGGTCCAAGTCTTTCGACGGAGGGGAAGCCGAGCCTTTTCTGAACTTGAAGTTCATCAATGGAGACCAGTGGCTCAGACTATACAGATAG 1101 41.6 MFFLVVFGGILMGFAKHNVHSEKYISWDDLKVDKMERTSSAYQNNQSRVIVVDEHGRGDSVTVQGAVDMVPEQNTKRVKIYIRPGIYREKVLVPRNKPYISFIGDDNQASNTVISWNNKASDKDKHGNNLGTYGSASASIESDYFCAMGITFQNTIKIEPKGVGRQAVALRIAGDKAMFYKVRIVGDQDTLLDESGTHYFYNCHIQGSVDFIFGRSKSLYEYNNLFFFLTCYLSSLQRCMLRSTAKKYGSIAAHHRDSSDEDTGFSFVRCRIEGTGNVLLGRAWGNYSRAIYSYCSMADIINPQGWSDWNYPSRQRTAVFGEYKCRGKGANTRGRVSWSKSFDGGEAEPFLNLKFINGDQWLRLYR 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2314174 2315619 - Bma010586.1 Bma14g00176 94157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00176 366 PANTHER PECTINESTERASE QRT1 11 364 - -
Bma14g00176 366 Gene3D - 48 365 IPR012334 -
Bma14g00176 366 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 11 364 - -
Bma14g00176 366 Pfam Pectinesterase 50 359 IPR000070 GO:0030599|GO:0042545
Bma14g00176 366 ProSitePatterns Pectinesterase signature 2. 205 214 IPR033131 -
Bma14g00176 366 SUPERFAMILY Pectin lyase-like 47 363 IPR011050 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01253 Bma14g00176 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01253 Bma-Chr7:47499335 Bma14g00176 Bma-Chr14:2314174 0 dispersed
Bma14g00176 Bma-Chr14:2314174 Bma14g01451 Bma-Chr14:27925480 3.38E-64 dispersed
Bma04g01615 Bma-Chr4:52100552 Bma14g00176 Bma-Chr14:2314174 6.98E-12 transposed
Bma14g00176 Bma-Chr14:2314174 Bma14g00694 Bma-Chr14:7557918 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00176 K01051 - jre:108983471 492.271