Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00185 ATGTATCGAAAATCCTCTCCTTACAAACCGTCTTCTCATCTCATCTCGAGACTCCGGAAGTACGAAGATCGCCACCGGCTTTGCGGACCACACTCCGAGTTCTTCAACGAGAGTCTAAAATTGCTCGGAGGCGACAAGAATTTCACTTCTTCGCCGTGCAAGTACGTAATCTTGATGACCCGGGACGGGCTGGGAAATAGAATGCTTGCGATCGCGTCGGCGTTTCTCTACACGTTGATCACGGATCGAGTGGTGCTGATTAACCGAGTGGATGTGTTGGACGATCTTTTCTGCGAGCCGTTCGGGGAGAGATCGTGGTTGTTGCCGGAGAATTTTCCGATGAGGGATCAATTCAGGTTCTTTAAGAACTCACTGGGCAACATTTTGAGGGACAATATTCATATCGAACCAAGTGCATTGCCATCATATTTATCTCTCTATCTGTCTCATAATGCCAACAATTATGACAAGCTATTTTACTGCGAGAAACACCAAGCTCTTATCCAAAACGTTCCATGGCTGATAATGGAGACCAACAACTACATAATTCCAGGTCTTTTCCTCATACCCTCTTTTGAAAAACAGTTTTCTAAATTGTTTCCCAGAAAGGATACTGTTTTTCATCAATTGGGTAGATACCTTTTCCACCCTACAAATGATGTATGGGGACTAATCAGTAGATACAACGATGCATACCTGTCGAAAGCGAAGGAGAAACTCGGCATCCAAATCCGGGTTTTCAAATCCGAATCCGGGTCTTTCCAACACCATATGGATCAGATTCTGGCCTGCACTCGATTGGGGAATCTCCTCCCGGAGCTAAACACGACGAGGCAGCAGGCGATTCTCCGGCCGAAGACTCGGAAAACGAAGGCGGTTTTGATAACGTCGTTGAGCTCAATGTACCTGGAGAATGCGAAGAAGCTGTACTGGGAATACCCAACTGAAAATGGCGATGTAATTGGGGTTTACCAGCCTAGCCATGAGAGGCGTCTTCTAAATTTTGTGGAGAAGGCTCTCGTGGAAGATCTAATCCCAATATTGGTAGCTGCCTTCCATTGCCAACTGAACCCACTTCTCTCACAGTGCATCCAAAGAGTGGCAAGGTCAGATCTGGATAGTGTCTCTCTAGATAAAGAGCTTCCTTACGAAGTCTCAAGCGAAATCAAAGAACTACGGCTCAAATCCGAGCAGGACACCATATCTTTTATCGACGAAGATGTAGATCCAATACGCGAAAAGGGCATTAGGAATATCCACAAGGCCCTGGATGCCGACGATGTTGAACTAGTCGAGTTACTTCTGAGCGAATCCACCGTCACCTTAAACGATGCTTTTGCTCTCCATTATGCCACTGCATATTGTGATCCTAAGGTCGTTAAGAAGATGCTAAATCTAAAATTGGCCGATCTCAACCTCAGAAACAAAAGGGGTTATACGATACTTCACATGGCTGCAAGACGGAAGGACCTGGAAGTTATATTGGCTCTTTTTGACCATGGAGCATCTGCATTACAATCTACGAGAGATGGACAAACTGCCGTTTCTATCTGCCGTAGGCTAACTCGGCCGAAGGACTATAACAAGACTGCAAAACAAGGGGAGGAATCTAACAAAGATAAGTTATGCGTCGATGTGTTAGAAAGAGAGATGCGAAGGAACTCGATTTCGGGTAAGGTGTTGATGATATCACAAGAGTTGCCTGGTGATATGGATGTATTGCTCAAGTACCTGGAAGATAGAGTGGGGCTGGCGTTGAGACTTTTTCCGGCGGAGGCGAAGACGGCAATGGCAAATGCAGATGCAGATTTGACAGCGTATTCTGACCGTTATACACAGCAAAAGGTTGATCTAAACGAAAGCCCTGCAGGAAGGGCTATAAGACTCCAGAAAAGAATGCAACACCTGTTAAGAACTGTGGAGACAGGAAGACGGTATTTTCCCAGTTGCTCGGAAGTGCTCGACAATTTGTTGGACGATATGCCAAACGAGCTTTATCTCGAAGAGGGAACTTCAGAAGAGCGAGAAAGGAAGAAGCAAAGGTTCATGGAACTCAAAGATGAAGTGAATAGGGCGTTCTTCAAGGACATTTCGAAGCAGTCTGGCCTGTCACCGTCCTCGTCGTCCTCGTCTTCCCCGAAGAACAAAATACGAAACAAGGTAAGGAAACGATGA 2175 45.89 MYRKSSPYKPSSHLISRLRKYEDRHRLCGPHSEFFNESLKLLGGDKNFTSSPCKYVILMTRDGLGNRMLAIASAFLYTLITDRVVLINRVDVLDDLFCEPFGERSWLLPENFPMRDQFRFFKNSLGNILRDNIHIEPSALPSYLSLYLSHNANNYDKLFYCEKHQALIQNVPWLIMETNNYIIPGLFLIPSFEKQFSKLFPRKDTVFHQLGRYLFHPTNDVWGLISRYNDAYLSKAKEKLGIQIRVFKSESGSFQHHMDQILACTRLGNLLPELNTTRQQAILRPKTRKTKAVLITSLSSMYLENAKKLYWEYPTENGDVIGVYQPSHERRLLNFVEKALVEDLIPILVAAFHCQLNPLLSQCIQRVARSDLDSVSLDKELPYEVSSEIKELRLKSEQDTISFIDEDVDPIREKGIRNIHKALDADDVELVELLLSESTVTLNDAFALHYATAYCDPKVVKKMLNLKLADLNLRNKRGYTILHMAARRKDLEVILALFDHGASALQSTRDGQTAVSICRRLTRPKDYNKTAKQGEESNKDKLCVDVLEREMRRNSISGKVLMISQELPGDMDVLLKYLEDRVGLALRLFPAEAKTAMANADADLTAYSDRYTQQKVDLNESPAGRAIRLQKRMQHLLRTVETGRRYFPSCSEVLDNLLDDMPNELYLEEGTSEERERKKQRFMELKDEVNRAFFKDISKQSGLSPSSSSSSSPKNKIRNKVRKR 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2400740 2407495 - Bma010597.1 Bma14g00185 94166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00185 724 Pfam Domain of unknown function (DUF3420) 371 420 IPR024228 -
Bma14g00185 724 PANTHER REGULATORY PROTEIN NPR3 329 723 IPR044292 GO:0009862|GO:2000022|GO:2000031
Bma14g00185 724 Gene3D - 390 582 IPR036770 -
Bma14g00185 724 Pfam NPR1/NIM1 like defence protein C terminal 519 711 IPR021094 -
Bma14g00185 724 SUPERFAMILY Ankyrin repeat 407 521 IPR036770 -
Bma14g00185 724 MobiDBLite consensus disorder prediction 696 724 - -
Bma14g00185 724 Coils Coil 668 688 - -
Bma14g00185 724 Pfam Ankyrin repeats (many copies) 464 517 IPR002110 GO:0005515
Bma14g00185 724 ProSiteProfiles Ankyrin repeat profile. 477 509 IPR002110 GO:0005515
Bma14g00185 724 SMART ANK_2a 477 506 IPR002110 GO:0005515
Bma14g00185 724 SMART ANK_2a 443 473 IPR002110 GO:0005515
Bma14g00185 724 SMART ANK_2a 414 442 IPR002110 GO:0005515
Bma14g00185 724 ProSiteProfiles Ankyrin repeat region circular profile. 477 503 - -
Bma14g00185 724 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 329 723 - -
Bma14g00185 724 Gene3D - 50 104 - -
Bma14g00185 724 MobiDBLite consensus disorder prediction 697 715 - -
Bma14g00185 724 Pfam Xyloglucan fucosyltransferase 1 331 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00185 Bma-Chr14:2400740 Bma14g00874 Bma-Chr14:9871538 2.14E-96 dispersed
Bma14g01656 Bma-Chr14:35160052 Bma14g00185 Bma-Chr14:2400740 8.38E-121 transposed
Bma14g00185 Bma-Chr14:2400740 Bma07g01067 Bma-Chr7:42798812 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00185 K14508 - zju:107416624 442.195