Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00190 CCGTCCATGGAGTCGGGGTACAGAGGGGAAAACTTAGTAGTTGGAGAAGTCGGTGGTAATGGAGTTTTTATTCAAACGACGAGAGTTGAAGCAAAGCTAGATGGGGGCAACATTCAAGAGGCTGAATCTTCATTACGGGAAGGCTTATCGTTGAATTTTGAGGAAGCCAGAGCTCTTCTTGGAAAGTTGGAGTATCAAAGAGGCAATGTGGAAGGGGCTCTTCGCGTTTTTGATGGCATCGATCTCCAAGCAGCAATTCAGAGATTGCAACCTTCATTTGCTGAAAAGATTCCGTCCAAAAAGGGTCGTTTTCGCACAGATTCGCAGCATGCAGTGTCTCAGCATGCTGCTAACCTGGTACTTGAAGCCATATATTTAAAAGCAAAGTCTCTTCAAAAGCTTGGGAAATTAACTGAGGCTGCTTATGAGTGTCAAAATGTTCTCAATGCTGTGGAGAAGATATTCTATCTAGGCATACCGGATGTGCAAGTTGACAATAGATTGCAAGAGACAGTTAGTCAAGCTGTTGAACTTCTTCCAGAGCTTTGGAAACAGGCGGGTTGCTACCAGGAAGCAATTTCTGCCTATCGACGAGCACTCTTGAGTCAATGGAACCTTGATAACGATACCTCCGCTAGGATTCACAAAGGATTTGCAGTTTTTCTACTTTATGGAGGAGTAGAAGCTAGCCCTCCTAGTTTAGCAGTTCAGGGTGAAGGCTCATATGTACCCAAAAACAATATAGAAGAGGCAATTCTACTTATGATGATTCTAATGAAGAATTTTTTCCTTGGTAAGATCAATTGGGATCCATCAGTAATGGATCACTTAACATTTGCACTATCTTTATGCAGCCAAACTTCAATTTTAGCTCAACAAATTGAAGAAATCATGCCAGGAGTATATCACCGAATAGATCGATGGATGTCTTTAGCTCTTTGTTACAGTGGAGCAGGACAAAATAAATCTTCCTTAAACCTGTTGAGGAAGTCCTTGCACAGACACGAAAAACCGAATGATATGCTGACATTGTTATTGGCTGCAAAGATCTGCAGTGAAGATTCTTACCTTGCTGCTGAAGGAGTTGGATATGCCCAAAGGGCGATTCGTAATGCAATAGGGAAAGAAGAGCATTTAAAGGGCGTGGGCCTTCGGATGTTGGGTCTTTGTTTGGGAAAGCAAGCGACGATATCCTCCTCCGATTTTGAGAGGTCAAGTCTTCAGTCGGAGGCATTGAAATCTCTCAATGGGGCAGCTTCTCTGGAGCGCAATAATTCCGATTTGAATAGTGAGTTGGGAGTTCAATATGCAGAACACAGGAATTTGATTGCTGCTTTGCGTTATGCGAAGAAGTATATCGATAAAACTGGTGGTTCTGTCTTAAAAGGCTGGAAATTGCTTGCTCTTGTGTTGTCTTCTCAGAAAAGATTTGCAGAGGCTGAGGTAGTAACCGATGCAGCTTTAGATGAGACTGCAAAATGGGAGCAAGGACCACTTCTCAGGCTTAAAGCCAAGCTGAAAATATCCCAGTCACTACACATGGATGCTATTGAAACTTATCGTTACCTCCTGGCATTAGTTCAAGCTCAAAGAAAATCATTCGGGCGGTCACTTAAACTTGTTAATCGGATTGAGGATGATAAGGTGCAGGAATTTGAAATATGGCATGGCCTGGCAAACCTGTACGCCAGCCTTTCACATTGGAAAGATGCAGAGATATGTTTGGGTAAGAGCAGAGAACTAAAACAATACTCTGCAGAGACGCTGCATATACAAGGCAAGAACTACAATGTTTTATCTGGAAGAATGTTATGTGTGATATGCGAAGGACGTGGACAATTCCCAGAAGCTCTGTCTGCTTATATTAATGCCCTCCTACTTGAGCCTCGCTATGTTCCCTGCAAGATATTGATTGGTGCCCGGTTGACCAAAACAGGCGCACAGTTGCCAATTGCCAAATCGTTGCTCTCCGATGCATTGAGGATCGACCCGACCAATAGGAAGGCTTGGTATTATTTGGGAGTTGTTCATAAGGAGGACGGGCGAGTAGCCCATGCCATCGATTGCTTTCAGGCCGCATCAATGCTCGAAGAATCCGATCCAATCGAAAGCTTCGGCTCTATTCTC 2127 43.63 PSMESGYRGENLVVGEVGGNGVFIQTTRVEAKLDGGNIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSFAEKIPSKKGRFRTDSQHAVSQHAANLVLEAIYLKAKSLQKLGKLTEAAYECQNVLNAVEKIFYLGIPDVQVDNRLQETVSQAVELLPELWKQAGCYQEAISAYRRALLSQWNLDNDTSARIHKGFAVFLLYGGVEASPPSLAVQGEGSYVPKNNIEEAILLMMILMKNFFLGKINWDPSVMDHLTFALSLCSQTSILAQQIEEIMPGVYHRIDRWMSLALCYSGAGQNKSSLNLLRKSLHRHEKPNDMLTLLLAAKICSEDSYLAAEGVGYAQRAIRNAIGKEEHLKGVGLRMLGLCLGKQATISSSDFERSSLQSEALKSLNGAASLERNNSDLNSELGVQYAEHRNLIAALRYAKKYIDKTGGSVLKGWKLLALVLSSQKRFAEAEVVTDAALDETAKWEQGPLLRLKAKLKISQSLHMDAIETYRYLLALVQAQRKSFGRSLKLVNRIEDDKVQEFEIWHGLANLYASLSHWKDAEICLGKSRELKQYSAETLHIQGKNYNVLSGRMLCVICEGRGQFPEALSAYINALLLEPRYVPCKILIGARLTKTGAQLPIAKSLLSDALRIDPTNRKAWYYLGVVHKEDGRVAHAIDCFQAASMLEESDPIESFGSIL 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2430693 2434528 - Bma030647 Bma14g00190 94171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00190 709 PANTHER PROTEIN NPG1 3 708 IPR043376 -
Bma14g00190 709 SMART tpr_5 667 700 IPR019734 GO:0005515
Bma14g00190 709 SMART tpr_5 552 585 IPR019734 GO:0005515
Bma14g00190 709 SMART tpr_5 461 494 IPR019734 GO:0005515
Bma14g00190 709 SMART tpr_5 121 154 IPR019734 GO:0005515
Bma14g00190 709 SMART tpr_5 598 631 IPR019734 GO:0005515
Bma14g00190 709 SMART tpr_5 305 338 IPR019734 GO:0005515
Bma14g00190 709 PANTHER CALMODULIN-BINDING PROTEIN 3 708 - -
Bma14g00190 709 SUPERFAMILY TPR-like 522 691 IPR011990 GO:0005515
Bma14g00190 709 SUPERFAMILY TPR-like 409 583 IPR011990 GO:0005515
Bma14g00190 709 Gene3D Tetratricopeptide repeat domain 23 253 IPR011990 GO:0005515
Bma14g00190 709 Gene3D Tetratricopeptide repeat domain 504 702 IPR011990 GO:0005515
Bma14g00190 709 Gene3D Tetratricopeptide repeat domain 280 488 IPR011990 GO:0005515
Bma14g00190 709 ProSiteProfiles TPR repeat profile. 667 700 IPR019734 GO:0005515
Bma14g00190 709 SUPERFAMILY TPR-like 121 338 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00190 Bma-Chr14:2430693 Bma07g01074 Bma-Chr7:43211408 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00190 K21843 - csv:101206641 1083.94