Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00222 ATGGATACCCATTTCCATAGCCTACCTCCTCTCAAACGATTCCGCATTCTGCAACATCAGCGAGAAGAATTCAATGGAGAACGAAGATCGGAACTAGGGCTAGCCGATAGCTCCGTCGACTCGCTTTCCCTTCCGGCGAAGAAGCGAAAAGAGCCTCGAGAATCGACTCCTGCGGATTCTGCCGCCGCCAGAACTGCTGCTCGCACCTCCGCCTATTTCCTTCCGGCAAAAAAAAGGATATGGGCCGTTCAGCCAGATTTCGCACTCGAACATGGTTATCTACCATTTGATCTTAATATCGAATATCAACCGCAAATAGAGGAAGAAGTAGAAAAAATATCAGCAAAAGAGACCAGTGATGAGAAAGAGGAAAAGAAAACCCCATCTCCTGCCTATGAAATTGAAGAAATCGATCGAATCAAGGAATGTAAAGAATATGAAAAGGAAGCAAACGAGGAAGAAGAAGATGACGGAATTCTCTGTGCAGTTTGTCAAAGCACAGACGGAGATCCATCAGATCCAATCGTCTTCTGTGATGGCTGCGATCTAATGGTCCACGCTTCCTGTTATGGAAACCCATTACTGAAACAAATACCAGAAGGCGACTGGTTTTGTGCCCAATGCTCATCCTCCCCTAAAGCTTCTGAAAATGGCGTCTCTTGCAGCCTCTGCCCAACCAAGGGAGGAGCAATGAAGCCAATGAAAGACGGCTCATGGGCTCACATCGTGTGCGTCCTCTTTGTGCCAGAGGCCTTCTTTGAGGATCCAGAAGGGCGAGAAGAGATCAATTGCTCGGCGATTCCCCAAAAAAGGTGGGACCAGAAATGCTACATCTGTAAAAGCGGGAGTGGGTGCGCTATTGATTGCTCTGAGCCGAAATGTAGTTTGTCTTTTCATGTTACTTGTGGGTTGAATGAAGATCTTTGTATAGAATACAGAGAGGGGAAGAGAAAGGGTGCTGTCGTTGCTGGTTTCTGCAAACAGCATTCTGAACTTTGGAATAAGGTAAACATTCTGAACTCTGGTTTTGAAATTTGA 1038 46.24 MDTHFHSLPPLKRFRILQHQREEFNGERRSELGLADSSVDSLSLPAKKRKEPRESTPADSAAARTAARTSAYFLPAKKRIWAVQPDFALEHGYLPFDLNIEYQPQIEEEVEKISAKETSDEKEEKKTPSPAYEIEEIDRIKECKEYEKEANEEEEDDGILCAVCQSTDGDPSDPIVFCDGCDLMVHASCYGNPLLKQIPEGDWFCAQCSSSPKASENGVSCSLCPTKGGAMKPMKDGSWAHIVCVLFVPEAFFEDPEGREEINCSAIPQKRWDQKCYICKSGSGCAIDCSEPKCSLSFHVTCGLNEDLCIEYREGKRKGAVVAGFCKQHSELWNKVNILNSGFEI 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2687995 2689032 - Bma010633.1 Bma14g00222 94203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00222 345 MobiDBLite consensus disorder prediction 25 64 - -
Bma14g00222 345 ProSiteProfiles Extended PHD (ePHD) domain profile. 218 330 IPR034732 -
Bma14g00222 345 SMART PHD_3 275 330 IPR001965 -
Bma14g00222 345 SMART PHD_3 160 209 IPR001965 -
Bma14g00222 345 ProSitePatterns Zinc finger PHD-type signature. 161 208 IPR019786 -
Bma14g00222 345 CDD PHD_BRPF_JADE_like 160 208 - -
Bma14g00222 345 PANTHER PHD FINGER PROTEINS 2 118 - -
Bma14g00222 345 Pfam PHD-zinc-finger like domain 220 329 - -
Bma14g00222 345 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 118 - -
Bma14g00222 345 PANTHER PHD FINGER PROTEINS 135 335 - -
Bma14g00222 345 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 135 335 - -
Bma14g00222 345 MobiDBLite consensus disorder prediction 43 57 - -
Bma14g00222 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 332 IPR013083 -
Bma14g00222 345 ProSiteProfiles Zinc finger PHD-type profile. 158 211 IPR019787 -
Bma14g00222 345 SUPERFAMILY FYVE/PHD zinc finger 148 224 IPR011011 -
Bma14g00222 345 Pfam PHD-finger 161 210 IPR019787 -
Bma14g00222 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 215 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g01298 Bma-Chr10:46395212 Bma14g00222 Bma-Chr14:2687995 5.09E-17 dispersed
Bma14g00222 Bma-Chr14:2687995 Bma01g01004 Bma-Chr1:10191446 2.55E-06 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58299 PF13832 zf-HC5HC2H_2 8.80E-29 CL0390 Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00222 K11380 - csv:101203744 404.445