Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00227 GAAAAAGTCGGGCTGGGAACATCTGATACGGACTCCGGAAAAGGAAAGAGCAAGATGTCGAAGAACATAACGCATGGATTTTATTTGGTCAAGGGAAAGTCACATCACGCCATGGAAGATTATGTCGTTGCTGAGTTTAAGCAAGTTGGTGAGAAAGAACTCGGTTTATTCGCAATTTTCGACGGCCATTTAAGTCACAACATTCCGAACTATTTACAGACGCATTTATTCGAGAATATCCTAAATGAGCCTGATTTTTGGACCAAACCAGCCAACGCAGTCAGGAAAGCGTATAGCGAAACAGATGCAATCATTCTGGACGAGGCAGTGGACTTAGGCAAAGGAGGATCTACTGCTGTTACGGCTATTCTGATCAATTGTCGTAAGCTGGTCGTAGCCAATGTTGGAGATTCTCGCGCAGTTATCTGTACAAATGGGGTGGCCACTCAATTATCAGTCGATCACGAGCCAAGTGTGGAAAAACATATGATCGAGAGTAGAGGTGGTTTCGTGTCGAACTTTCCAGGAGACGTAGCTCGAGTCGATGGGCAGCTTGCAGTGGCCAGAGCGGTGATGTCGAACCAGGAGGCAGCAGACTCGATCAAGCATGTCAAGGATGCTCGAGCGGCAGCCAAGCAATTGACGGATGAGGCTCTGAAAAGGAAGAGCACGGATGATATTTCATGTATAGTTGTGAGATTTCAGTGA 708 46.47 EKVGLGTSDTDSGKGKSKMSKNITHGFYLVKGKSHHAMEDYVVAEFKQVGEKELGLFAIFDGHLSHNIPNYLQTHLFENILNEPDFWTKPANAVRKAYSETDAIILDEAVDLGKGGSTAVTAILINCRKLVVANVGDSRAVICTNGVATQLSVDHEPSVEKHMIESRGGFVSNFPGDVARVDGQLAVARAVMSNQEAADSIKHVKDARAAAKQLTDEALKRKSTDDISCIVVRFQ 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2774605 2775996 + Bma010638.1 Bma14g00227 94208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00227 235 PANTHER PROTEIN PHOSPHATASE 2C 191 235 IPR015655 GO:0004722|GO:0006470
Bma14g00227 235 Pfam Protein phosphatase 2C 35 190 IPR001932 -
Bma14g00227 235 Gene3D - 7 190 IPR036457 -
Bma14g00227 235 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 191 235 - -
Bma14g00227 235 PANTHER PROTEIN PHOSPHATASE 2C 1 190 IPR015655 GO:0004722|GO:0006470
Bma14g00227 235 Gene3D - 191 235 IPR036457 -
Bma14g00227 235 ProSiteProfiles PPM-type phosphatase domain profile. 24 234 IPR001932 -
Bma14g00227 235 SUPERFAMILY PP2C-like 20 234 IPR036457 -
Bma14g00227 235 SMART PP2C_4 19 232 IPR001932 -
Bma14g00227 235 CDD PP2Cc 25 234 IPR001932 -
Bma14g00227 235 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00227 Bma-Chr14:2774605 Bma14g00257 Bma-Chr14:3049750 4.86E-169 dispersed
Bma14g00227 Bma-Chr14:2774605 Bma07g00627 Bma-Chr7:9974271 3.11E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00227 K17506 - qsu:112032877 372.859