Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00231 ATGGGGAGGGATCGAAACGGTGTGTTAGCAGGAGGTGCCGGGGCTGAAAGCCCTCGGAGAAATGAAGAATACGCAGAAGAAAAGGAAGAAGAAGCTCCACTAAGAAGAAGTCGCGATAGGAAATCAGGAGGAAAATCGAGGGGAAGTTCTGATCCGGATGATAGAGGCGGGAAAAAACGGGGACGAAGTCACAGAGGGAAGCGAAAGTCTCGCAGACGAGAGAGTAGTGATGAAGTTTCTGATTCGGAGGATGATAAGTCGGAGAGTTCTGATTCTGCGTCAGGCACCGAACATTCGGATTCGGAATCACATGGTTCTGATTCTGAGGGAGAGAGTGAAAGCGAGGAGGAGAGGAGAAGAAGGAAAAGAAAGGAGATGAGAAGGAGAGAAAAAGAAGAGGAAAGAGAGAGGAAAAGGAGGAGGAGGGAGAAGGAGAAGAAGAGGAGGAAGAGGGAGAAAGAGGAAAGAAAGAGGAAGGAAAAGAAGAAGAAGGAAAAGAAGGAGAGAGGAGAAAGAGGGAAAACAGGCGCAGTCACTGACTCGTGGGGCAAATATGGGATAATCCGAGAAACTGATATGTGGACCAAGCGACCTGAGTTTACTGCTTGGTTAGCTGAAGTTAAGAAGGTGAACCTGGAAAGTTTGCCTAATTGGGAAGAGAAGCAGATGTTCAAGGAGTTCATGGAGGACCACAATACAGCCACGTTTCCTTCTAAGAAATACTACGGTCTAGATGCTTATCACAGACGCCAAATGGAAAAGGAGATGAAAAAGGGTTTCAAAAAGATCAAGAATACAGAACGAACTGTCTTCAATGATGAAGAACAACGCCGGCAAGAATTGCTCCAAGAAAGAGAGAAGCACAAAGAAGAGCAAGTGGAAGCATTGAAGCGCTCTATGCAGAGTGGAATGGCACAAGCTATGAAAGAGCAAGCTCAGCTTAGGGAGGAGATGGCCTTCCAGTACAAGATTGGAAACTCTGAGGCAGCAGCTGCCATACAAAGGAGATTGGAGCCTGACGTTGCTATGTAA 1032 46.8 MGRDRNGVLAGGAGAESPRRNEEYAEEKEEEAPLRRSRDRKSGGKSRGSSDPDDRGGKKRGRSHRGKRKSRRRESSDEVSDSEDDKSESSDSASGTEHSDSESHGSDSEGESESEEERRRRKRKEMRRREKEEERERKRRRREKEKKRRKREKEERKRKEKKKKEKKERGERGKTGAVTDSWGKYGIIRETDMWTKRPEFTAWLAEVKKVNLESLPNWEEKQMFKEFMEDHNTATFPSKKYYGLDAYHRRQMEKEMKKGFKKIKNTERTVFNDEEQRRQELLQEREKHKEEQVEALKRSMQSGMAQAMKEQAQLREEMAFQYKIGNSEAAAAIQRRLEPDVAM 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2796596 2799700 - Bma010642.1 Bma14g00231 94212

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00231 343 Coils Coil 271 299 - -
Bma14g00231 343 MobiDBLite consensus disorder prediction 158 175 - -
Bma14g00231 343 MobiDBLite consensus disorder prediction 19 59 - -
Bma14g00231 343 MobiDBLite consensus disorder prediction 1 181 - -
Bma14g00231 343 Coils Coil 249 269 - -
Bma14g00231 343 MobiDBLite consensus disorder prediction 71 140 - -
Bma14g00231 343 Coils Coil 112 171 - -
Bma14g00231 343 MobiDBLite consensus disorder prediction 141 157 - -
Bma14g00231 343 PANTHER NUCLEIC ACID-BINDING PROTEIN 1 343 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00231 - - - zju:107403711 305.834
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g243 Blo03g00650 . Bda07g00292 . . . . . . Cmo04g00975 . . . . . . . . . . . . . . Cla10g00644 Cam10g0640 Cec10g0662 Cco10g0637 Clacu10g0663 Cmu10g1490 Cre10g0872 . . . Cone15ag1062 . Csa03g00624 . . . . . . . Bpe01g00425 . Bma14g00231 . . . Cma04g00908 . Car04g00851 . . . . . . . . . . . . . . . . . Lsi05g00713 . Chy06g01702 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002999 3 1 2 3 1 1 1 1 1 2 1 1 1 2 1 2 1 1 1 1 2 2 1 1 3 1 2 2 2 0 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma14g00231 Bma_Chr14 FPKM 14.060185 14.322681 16.771427 18.80378 55.50671 54.839211 55.452694 17.10726 16.891169 17.19211