Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00233 ATGAAGAAAGACGTACAGAAAATGGTGCTTCTGTTTATTGTTTTTTCGTTTTCAGCTCTGATGCTGAGTGCAGAAAGTTCAACAATAAACCCTAAATGTCAAGATCGCTGCGGAAGTGTTCAGATTCCTTACCCGTTCGGAATCGGCCCTGATTGCTACCTGAATAAAGGATTCGCCGTTTCTTGCAACAAATCAGGAGACGACTCTGCACCGAAGCTTTTTGCGACGAGTATCAATATGGAAATTCTTGAAATATTGGTCGATCAAAGTAGATTCCGCGTCAATAACCCTGTGGTTTTCTCTAACTGCGGAAAGAAGAACAACACTGAAACATTCATCGAACTCGTCAGTAGCCCCTTTAAGTTATCGGGCCAAGATAATCAATTCACTGCCATGGGATGCGACAATCTGGCTTTTCTCTCCGAAGGAAATAGAATCTACGGCGGCTGCCTCTCGATTTGTCTCGAGGTAGTGGGCCTCAATCCATCGTCGACGAACGAAACGAATCTCGGAAGGTGCAACGGCATCAACTGCTGCCAAACTTCAATTCCACCGTTTCTGAATCGTATCGGCGTGTCGATGCAGGGAACAAATGCGACTAGAGGAAAGGCGGAGTCGAACTGCAGATATGGTTTCATAGTGGAAAAGGCATGGTTCAACCAAAACGACGTCGATGCTAACAACACGGATTTCGTCCCTGCGATCCTGCTTTGGGGAACGGGCGGCGTTAATTGCACAACTGGATCGAACAACACTCTGCTTTGCGGAAGAGACGCTCGATGTTCATCGGTGGTCGGAGTTTCTGAAGGTGTCTGTAAATGTGAATATGGATACGAGGGAAACCCTTACCTTCCTTACGGATGCCAAGAAATAAATTACTGCAGCCGAGAGAGGAACCCTTGCTCCGACGCAATCTGTCAAACACGACCATCCGGTGCCCTTTGCAATCATTCTTCGGATGGCCTCACCTTCCAAAGCGACCACATTCACACCGTGACCGTGGTACGTCTTCAAGTGGTCTTCATAGGTTGCATTGTTGCGTTTGGAGGGATATTTCTTATGATCTTTCCATGGTGGTTGTACAGACTACTGCGAAGAAGAAGGATAAAAAAACAGAGAGAAACTTTCTTCAAAACAAACGGAGGATTATTGCTTGAACAGCTCTCTCCGACTGAAACTGGTTTTGAAAAATCAAGAATATTTTCTGAAGAAGAGCTGCTGAAGGCCACAGATCAATACAACGAGAACAGAATTTTAGGGCAAGGAGGCCAAGGCACCGTCTTCAAAGGGATGATGACGAACGGCAGGATCGTCGCCGTTAAAAAGTCAAAGATCGAAAACAGCAGCCTCCTCCAGCAATTCATCAACGAGGTTGTCATTTTGTCTCAGATCAACCATAGGAACGTCGTCAAGTTATTAGGGTTTTGTTTGGAAAGTGAAGTTCCTCTTCTTGTTTACGAGTTCATCCCTAATGGAACTCTTTTCCAGCACCTCCATGAGCCAAGCGAGGACTTCCCATTTACATGGGACATGCGATTGAGAGTCGCCGTCGAAATTGCATCGGCCGTTTCGTACCTGCACTCGGCTGCCTCAATCCCGATATATCACCGAGATATCAAGTCGACAAACATTCTGTTAGACGAAAAGTACGTCGCGAAAGTTTCTGATTTCGGAGCATCAAAATCGGTGGCAGTTGATCAGACACACATGACCACGAAAGTTCAAGGAACTTTTGGATATCTAGACCCTGAATATTTTCAATCAAATCAGTTCACCGAAAAGAGTGACGTGTACAGCTTTGGTGTTGTTCTGATCGAGCTTTTAACCGGACAGAAGCCAATATCAGCCACAAGATCTAAAGAAGAACAAAACTTATCTGCATTGTTCCTCACGTTGATGAAGGAGGATCGCCTTAACGAGATTCTCGATGCTAGAATTTCGAATGATGGAAAGAAAGAAACCATGTCGGCAGTGGCGAAGCTTGCAAAAAGGTGTCTGAATCTGAACGGGAAGAAGAGACCGACGATGAAAGAAGTTGCATCGGAGCTGGAGAGGATTAGATCTCAAATTTCTGTGGCGGAAATGGAAGAGAATGATGATCAGACTGAGGTTGAAGGTGAATATGGTGTCGTTGAAAATTCCATGGCTACAAGTCAGGAAATTTGGCCAATCTCCATTTCAACCAATTCTGATGCTCATGCTGACTGA 2208 45.24 MKKDVQKMVLLFIVFSFSALMLSAESSTINPKCQDRCGSVQIPYPFGIGPDCYLNKGFAVSCNKSGDDSAPKLFATSINMEILEILVDQSRFRVNNPVVFSNCGKKNNTETFIELVSSPFKLSGQDNQFTAMGCDNLAFLSEGNRIYGGCLSICLEVVGLNPSSTNETNLGRCNGINCCQTSIPPFLNRIGVSMQGTNATRGKAESNCRYGFIVEKAWFNQNDVDANNTDFVPAILLWGTGGVNCTTGSNNTLLCGRDARCSSVVGVSEGVCKCEYGYEGNPYLPYGCQEINYCSRERNPCSDAICQTRPSGALCNHSSDGLTFQSDHIHTVTVVRLQVVFIGCIVAFGGIFLMIFPWWLYRLLRRRRIKKQRETFFKTNGGLLLEQLSPTETGFEKSRIFSEEELLKATDQYNENRILGQGGQGTVFKGMMTNGRIVAVKKSKIENSSLLQQFINEVVILSQINHRNVVKLLGFCLESEVPLLVYEFIPNGTLFQHLHEPSEDFPFTWDMRLRVAVEIASAVSYLHSAASIPIYHRDIKSTNILLDEKYVAKVSDFGASKSVAVDQTHMTTKVQGTFGYLDPEYFQSNQFTEKSDVYSFGVVLIELLTGQKPISATRSKEEQNLSALFLTLMKEDRLNEILDARISNDGKKETMSAVAKLAKRCLNLNGKKRPTMKEVASELERIRSQISVAEMEENDDQTEVEGEYGVVENSMATSQEIWPISISTNSDAHAD 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2808246 2812441 - Bma010644.1 Bma14g00233 94214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00233 735 SUPERFAMILY Protein kinase-like (PK-like) 397 684 IPR011009 -
Bma14g00233 735 CDD STKc_IRAK 419 686 - -
Bma14g00233 735 Pfam Wall-associated receptor kinase galacturonan-binding 33 95 IPR025287 GO:0030247
Bma14g00233 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Bma14g00233 735 Gene3D Phosphorylase Kinase; domain 1 386 488 - -
Bma14g00233 735 Pfam Protein kinase domain 413 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00233 735 Gene3D Transferase(Phosphotransferase) domain 1 489 712 - -
Bma14g00233 735 SMART serkin_6 413 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00233 735 Coils Coil 676 696 - -
Bma14g00233 735 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 703 IPR045274 GO:0007166
Bma14g00233 735 PANTHER PUTATIVE-RELATED 23 703 - -
Bma14g00233 735 ProSiteProfiles Protein kinase domain profile. 413 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma14g00233 Bma-Chr14:2808246 Bma14g00234 Bma-Chr14:2834272 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66870 PF00069 Pkinase 2.90E-54 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00233 - - rcu:8286731 699.893