Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00238 ATGGGTTGTATTTGCGGCAAGCCCTCTGCTATTGAAGATATTAAAGAGAGTCCAAGAGAGAGGCTACCGAGTAAAACAGCATCCAACCTGCGGGGGTTGAGGGTGGCTTCGTCCAGGAGGGATGAAGCATATCATTCCAAAGATCAATGTGATGCTATTGGCCAAGGTACTTACAGCAATGTCTATAGAGCTCGGGATCTTGATCAAAAGAAAATTGTTGCCTTGAAAAAAGTTAGATTTGACAATCTGGAACCTGAGAGTGTTCGCTTTATGGCTAGGGAGATTCTTATTTTACGAAGACTCGATCATCCAAATGTAATTAAATTGGAAGGTCTAGTTACGTCTAGGATGTCTTGCAGCTTATACCTTGTTTTTGAGTACATGGAGCACGACTTGGCTGGGCTAGCCTCACTACCTGGACTGAAGTTTACTGAAGCACAGGTCAAATGTTACATGCAGCAGCTATTACGAGGTCTTAATCACTGTCACAGTCATAATGTCCTTCATCGTGACATCAAAGGTTCCAATCTTCTCATTGATAACAATGGGATCCTAAAAATTGCGGATTTTGGTCTGGCAAGTTTCTATGATTCCAATCAAAGTCAGCCACTCACCAGTCGTGTCGTGACTCTTTGGTACCGGCCACCAGAGCTATTACTTGGAGCCACTTACTATGAGACTGCTGTAGATTTATGGAGTACGGGATGCATACTTGCTGAACTGTATGCTGGCAAGCCTATTATGCCGGGAAGAACTGAGGTGGAGCAGCTGCATAAAATATTCAAACTTTGTGGCTCCCCTTCTGAGGAGTATTGGAGAAAGTCAAAGTTGCCACATGCCACTATATTTAAGCCCCAGCAGCCCTATAGACGATGTGTTGGAGAAACATTCAAGGACTTTCCGGCCCCAGCCTTGTCTCTTATTGAAACTCTACTTTCTATCGATCCTGCTGATCGTCGATCTGCTTCTTCTGCTCTTAAAAGTGAGTTTTTTGCATCAAAACCACTTCCTTGTGATCCGTCGAGCTTGCCGAAATATCCTCCCAGCAAAGAGTTTGATGCAAAACTAAGAGATGAAGAAGCTAGAAGACTAGGAGCAGGTGGAGTCAAGGGCCAGAGACTTGATCTTGAAAGAAAAGGGACACGCGAGTCTCGAGCTGTCCCAGCTCCTGATGCCAATGCTGAATTAGTCTTGTCAATGCAGAAAAGACAAAGTCAGTCTAACTCAAAAAGTCGGAGTGAGAAGTTCAACCCTCATGCAGAAGAAGTTGCATCGGGCTTTCCAATCGACCCACCTAGACCGTCACAAGCTACAGAAGTGAATATAGATTCTCAGGTGCATCATCCCAAGAGAGCTTCTCATTCCGGGCCACTGGCTCAGAGGGCTGCCTGGGCTAAGACCGGTAAGAGCAACCAAGATGAAGCTCCCAAAATCTCAACCATGGCCGATGTGCCTATAATGCCGGGACTCGTGGCTGCAAGGAGGAGTATGATAACTGAGGATCGACGAGAAAGACCGGGGCCTACCCAAGCAGAAGTTCAAAAACTTATGTGCAGGTTTCCTGGGTCCTTCAAAGAACCTTCTGAAGCATTGGCATCACAAGATCAAAAACAGCATCCTGAAGATGTTATGGGTTCTCAGAAAGATGATGGAAAAGTCGGAACGAAAGATCCTAATCTCTACTTGTTAATTCTCCAGATTGGTTATGGTTCCAAGGGTCACAAAATTCATTACTCTGGCCCGTTGCTGGTTCCATCGGGCAACATGGATCAGATGCTGAAGGACCATGATCGCCATATCCAAGAGGCTGTTAGACGATCGCGGCTTGACAAAGCAAAGATTAGGAAGAAACAAGTTGAAGGTAATCAAGCTTCAACCAATCCATTATTTATTTCGGGTCGTTGA 1905 45.25 MGCICGKPSAIEDIKESPRERLPSKTASNLRGLRVASSRRDEAYHSKDQCDAIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASLPGLKFTEAQVKCYMQQLLRGLNHCHSHNVLHRDIKGSNLLIDNNGILKIADFGLASFYDSNQSQPLTSRVVTLWYRPPELLLGATYYETAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSKLPHATIFKPQQPYRRCVGETFKDFPAPALSLIETLLSIDPADRRSASSALKSEFFASKPLPCDPSSLPKYPPSKEFDAKLRDEEARRLGAGGVKGQRLDLERKGTRESRAVPAPDANAELVLSMQKRQSQSNSKSRSEKFNPHAEEVASGFPIDPPRPSQATEVNIDSQVHHPKRASHSGPLAQRAAWAKTGKSNQDEAPKISTMADVPIMPGLVAARRSMITEDRRERPGPTQAEVQKLMCRFPGSFKEPSEALASQDQKQHPEDVMGSQKDDGKVGTKDPNLYLLILQIGYGSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRSRLDKAKIRKKQVEGNQASTNPLFISGR 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2878166 2883565 + Bma010649.1 Bma14g00238 94219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00238 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Bma14g00238 634 ProSiteProfiles Protein kinase domain profile. 47 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00238 634 SUPERFAMILY Protein kinase-like (PK-like) 50 339 IPR011009 -
Bma14g00238 634 ProSitePatterns Protein kinases ATP-binding region signature. 53 76 IPR017441 GO:0005524
Bma14g00238 634 MobiDBLite consensus disorder prediction 613 634 - -
Bma14g00238 634 PANTHER CYCLIN-DEPENDENT KINASE 46 616 - -
Bma14g00238 634 MobiDBLite consensus disorder prediction 525 552 - -
Bma14g00238 634 Pfam Protein kinase domain 51 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00238 634 CDD STKc_CDK9_like 44 331 - -
Bma14g00238 634 Gene3D Transferase(Phosphotransferase) domain 1 135 368 - -
Bma14g00238 634 SMART serkin_6 47 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00238 634 Gene3D Phosphorylase Kinase; domain 1 42 134 - -
Bma14g00238 634 MobiDBLite consensus disorder prediction 619 634 - -
Bma14g00238 634 PANTHER CELL DIVISION PROTEIN KINASE 46 616 - -
Bma14g00238 634 MobiDBLite consensus disorder prediction 362 478 - -
Bma14g00238 634 MobiDBLite consensus disorder prediction 398 413 - -
Bma14g00238 634 MobiDBLite consensus disorder prediction 362 385 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00731 Bma-Chr12:33462028 Bma14g00238 Bma-Chr14:2878166 0 dispersed
Bma12g00732 Bma-Chr12:33566462 Bma14g00238 Bma-Chr14:2878166 0 dispersed
Bma14g00238 Bma-Chr14:2878166 Bma15g00068 Bma-Chr15:810870 0 dispersed
Bma14g00238 Bma-Chr14:2878166 Bma02g01380 Bma-Chr2:56137511 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66872 PF00069 Pkinase 3.30E-68 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00238 - - cit:102626724 948.732