Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma14g00255 | ATGGCTGATGCTGTGATGATCTCTGAGGCTGTGGGATCAAGGTTTAGTTCGTTGGAGCTCATTGGGAGGGGATCATTTGGAGACGTCTATAAGGGGTTTGATGAGGAGCTCAACAAAGAAGTTGCTATAAAAGTTATTGATTTAGAAGAATCAGAAGATGAAATTGAGGATATTCAGAAGGAAATTTCTGTATTATCACAATGTCGATCTTCTTATATCACAGAGTATTACGGTTCTTATCTTAACCAGACTAAATTATGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCAGACTTGCTTCAATCAGGTCCACCTTTGGATGAAATGGCGATTGGTTGCATTCTACGTGACTTGCTGCATGCAGTTGACTATTTACACAATGAAGGAAAAATCCACCGGGATATCAAAGCGGCAAACATTTTGTTGACCGAGAATGGTGATGTGAAGGTTGCAGATTTTGGTGTTTCTGCGCAATTAACTAGGACAATTTCAAGAAGAAAGACATTTGTAGGAACACCCTTTTGGATGGCACCAGAAGTAATTCAAAATTCAGAAGGATATAACGAAAAGGCGGATATCTGGTCTCTTGGAATCACTGCTATTGAGATGGCAAAAGGGGAGCCTCCTCTTGCGGATCTTCATCCAATGAGAGTTCTTTTTATCATACCTCGGGAGAATCCACCTCAGTTGGATGAGCATTTTTCTCGTCCAATGAAAGAATTTGTATCACTGTGTCTGAAGAAAGTACCAGCTGAGAGGCCAAGTGCCAAGGAGCTTCTAAAGCATCGATTTATTAGAAATGCGAGGAAGAGTCCAAGGCTTCTAGAAAGAATTAGAGAGCGTCCAAAGTATCAAATAAAGGAGGATGTTGAAACGACTAGAAATGGTCCTAGAGATATGGGGGAGTTGTCTGACACAGTCAAGGCGCCAAGAAGTTTACTAAGAGAAGAAAATGCGCATATTAGTAATCAGGGTAAAACCACAAAAAATGCTGGATGGGATTTTAGCATTGGTGGCTCACATGGAACAGGTACAGTTCGAAGTATAGTTAAACCACCTCAATTTGGAGAAAAGAAACCTGAAGTTCCACTCTCTGGTGGAAACCTACGGTTTGCTGCCTATGGAAATGCACTTCGTGATGCCCCTGAAGGATTTTTTACAAAGGATGCTCGAGATTTATACCATGATAAACGTCGGGAAGATGAAGAGTTATCAGTAAGTGGATCTGGAACTGTTGTGATTCGATCTCCCCGAGGATCTCAGTCGACCGAATTCTTTAATCAAAGCAGTCTGTCAGGGAGCACTTATGCATTGTTGGAAGATACTTCATCTAGTGGAACTGTAGTTATTCGCGGGCAACATGATGATACAGATTCTCCCCGAACTCCAAAGTCCAGACTTGGCCTTCAGGATAGGACTTCCACAGCCTCATTTGAAGACAGTGAATTAAACCTTTCAGAGGCAAAGGCTGCAATTCAAGCAGGGTTAAAGAAATCAAATGCTAGAGAAAGGTCTGCGCTTGGAAAAATTAATAATGATGGGAAGGAGAATCGAAGAAGAGGGGAAATAACCAGTAGCGTTGATTCTTCCAGAGATTCTAATGAATACTTAGATGGGCCAAAAGCATTTTCAAGATCGCAACCAGCAACTGAGACTGAAGAAAGTGCAAAAGTATTATCATCTTCTTCACCGTTATCTATTTTGCTCATCCCATCTTTGAAGGAGATTTGTGTTGAGACCATATTCTCGGATGGGCTTGACATACCAATGAGCATTTCACAGGCTTCTGATTCGGTCAGTCTGAAAGAGATACCACATTATGAAATTAAAATTGGCGAAGAATGCGACTGGGTTAAGATAACTCAGGAATCATTTAATCCAATTGAAATAACCAAAGGACTTTGGATAGTTCCACAATGGAGAACTCCGCCGGACGTCGAAGCGACAAACATAATTCTTAATCCTGGACTAGCATTTGGAACCGGTGAGCACCCAACGACAAAGTTGTGCATATTATTGCTAAGCAGCCTCGTCAAAGGAGGGGAACGTTTCTTGGACTATGGCACGGGTTCTGGAGTTCTTTCAATTGCAGCTCTCAAGTTTGGTGCTGCCTCATCTGTTGGAATTGACATAGATCCACTAGCCATTGCATCTGCTAAGCACAATGCTGATTTGAACAATATAGGACCGGATCACATGAAATTACAACTGATTTCTGGAAAGGAAATCGTATGGAAATATGATTTGGTTGTCGCGAATATTCTTTTGAATCCTCTCCTAGATTTGGCAGATCATATTGTCTCCTTTGCCAAGCCTGGTGGAATTGTTGGTCTTTCTGGTATTCTCTCTGAGCAGGTTCCATGTATTATAGAGCGATACTCGCAGTACTTGGAGGACATATCTGTAACGGAGATGGATGATTGGGGATGTGTTAGTGGCAAAAAGAGAATAAATGTTGGGGGTGAAGAATGA | 2478 | 41.69 | MADAVMISEAVGSRFSSLELIGRGSFGDVYKGFDEELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSSYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMAIGCILRDLLHAVDYLHNEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLKHRFIRNARKSPRLLERIRERPKYQIKEDVETTRNGPRDMGELSDTVKAPRSLLREENAHISNQGKTTKNAGWDFSIGGSHGTGTVRSIVKPPQFGEKKPEVPLSGGNLRFAAYGNALRDAPEGFFTKDARDLYHDKRREDEELSVSGSGTVVIRSPRGSQSTEFFNQSSLSGSTYALLEDTSSSGTVVIRGQHDDTDSPRTPKSRLGLQDRTSTASFEDSELNLSEAKAAIQAGLKKSNARERSALGKINNDGKENRRRGEITSSVDSSRDSNEYLDGPKAFSRSQPATETEESAKVLSSSSPLSILLIPSLKEICVETIFSDGLDIPMSISQASDSVSLKEIPHYEIKIGEECDWVKITQESFNPIEITKGLWIVPQWRTPPDVEATNIILNPGLAFGTGEHPTTKLCILLLSSLVKGGERFLDYGTGSGVLSIAALKFGAASSVGIDIDPLAIASAKHNADLNNIGPDHMKLQLISGKEIVWKYDLVVANILLNPLLDLADHIVSFAKPGGIVGLSGILSEQVPCIIERYSQYLEDISVTEMDDWGCVSGKKRINVGGEE | 825 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 3020751 | 3035016 | - | Bma010668.1 | Bma14g00255 | 94236 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma14g00255 | 825 | SUPERFAMILY | Protein kinase-like (PK-like) | 12 | 306 | IPR011009 | - | |
Bma14g00255 | 825 | Hamap | Ribosomal protein L11 methyltransferase [prmA]. | 522 | 817 | IPR004498 | GO:0006479|GO:0008276 | |
Bma14g00255 | 825 | Pfam | Ribosomal protein L11 methyltransferase (PrmA) | 576 | 817 | - | - | |
Bma14g00255 | 825 | MobiDBLite | consensus disorder prediction | 402 | 428 | - | - | |
Bma14g00255 | 825 | CDD | STKc_MST3_like | 13 | 287 | - | - | |
Bma14g00255 | 825 | ProSitePatterns | Protein kinases ATP-binding region signature. | 21 | 44 | IPR017441 | GO:0005524 | |
Bma14g00255 | 825 | MobiDBLite | consensus disorder prediction | 292 | 311 | - | - | |
Bma14g00255 | 825 | MobiDBLite | consensus disorder prediction | 449 | 483 | - | - | |
Bma14g00255 | 825 | MobiDBLite | consensus disorder prediction | 411 | 428 | - | - | |
Bma14g00255 | 825 | Gene3D | Vaccinia Virus protein VP39 | 626 | 822 | IPR029063 | - | |
Bma14g00255 | 825 | Pfam | Protein kinase domain | 16 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma14g00255 | 825 | ProSiteProfiles | Protein kinase domain profile. | 15 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma14g00255 | 825 | MobiDBLite | consensus disorder prediction | 504 | 528 | - | - | |
Bma14g00255 | 825 | MobiDBLite | consensus disorder prediction | 465 | 483 | - | - | |
Bma14g00255 | 825 | MobiDBLite | consensus disorder prediction | 503 | 559 | - | - | |
Bma14g00255 | 825 | TIGRFAM | prmA: ribosomal protein L11 methyltransferase | 560 | 810 | IPR004498 | GO:0006479|GO:0008276 | |
Bma14g00255 | 825 | Gene3D | Transferase(Phosphotransferase) domain 1 | 12 | 302 | - | - | |
Bma14g00255 | 825 | SMART | serkin_6 | 15 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma14g00255 | 825 | MobiDBLite | consensus disorder prediction | 346 | 367 | - | - | |
Bma14g00255 | 825 | PANTHER | STERILE20-LIKE KINASE, ISOFORM B-RELATED | 3 | 578 | - | - | |
Bma14g00255 | 825 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 3 | 578 | - | - | |
Bma14g00255 | 825 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 607 | 814 | IPR029063 | - | |
Bma14g00255 | 825 | Coils | Coil | 41 | 68 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00127 | Bma-Chr1:1244103 | Bma14g00255 | Bma-Chr14:3020751 | 2.25E-73 | dispersed | |
Bma10g00841 | Bma-Chr10:15014080 | Bma14g00255 | Bma-Chr14:3020751 | 5.67E-59 | dispersed | |
Bma14g00255 | Bma-Chr14:3020751 | Bma15g00785 | Bma-Chr15:16763102 | 1.93E-56 | dispersed | |
Bma14g00255 | Bma-Chr14:3020751 | Bma12g00255 | Bma-Chr12:3305310 | 2.76E-68 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66873 | PF06325 | PrmA | 1.60E-73 | CL0063 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma14g00255 | K08838 | - | vvi:100258981 | 862.062 |