Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00255 ATGGCTGATGCTGTGATGATCTCTGAGGCTGTGGGATCAAGGTTTAGTTCGTTGGAGCTCATTGGGAGGGGATCATTTGGAGACGTCTATAAGGGGTTTGATGAGGAGCTCAACAAAGAAGTTGCTATAAAAGTTATTGATTTAGAAGAATCAGAAGATGAAATTGAGGATATTCAGAAGGAAATTTCTGTATTATCACAATGTCGATCTTCTTATATCACAGAGTATTACGGTTCTTATCTTAACCAGACTAAATTATGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCAGACTTGCTTCAATCAGGTCCACCTTTGGATGAAATGGCGATTGGTTGCATTCTACGTGACTTGCTGCATGCAGTTGACTATTTACACAATGAAGGAAAAATCCACCGGGATATCAAAGCGGCAAACATTTTGTTGACCGAGAATGGTGATGTGAAGGTTGCAGATTTTGGTGTTTCTGCGCAATTAACTAGGACAATTTCAAGAAGAAAGACATTTGTAGGAACACCCTTTTGGATGGCACCAGAAGTAATTCAAAATTCAGAAGGATATAACGAAAAGGCGGATATCTGGTCTCTTGGAATCACTGCTATTGAGATGGCAAAAGGGGAGCCTCCTCTTGCGGATCTTCATCCAATGAGAGTTCTTTTTATCATACCTCGGGAGAATCCACCTCAGTTGGATGAGCATTTTTCTCGTCCAATGAAAGAATTTGTATCACTGTGTCTGAAGAAAGTACCAGCTGAGAGGCCAAGTGCCAAGGAGCTTCTAAAGCATCGATTTATTAGAAATGCGAGGAAGAGTCCAAGGCTTCTAGAAAGAATTAGAGAGCGTCCAAAGTATCAAATAAAGGAGGATGTTGAAACGACTAGAAATGGTCCTAGAGATATGGGGGAGTTGTCTGACACAGTCAAGGCGCCAAGAAGTTTACTAAGAGAAGAAAATGCGCATATTAGTAATCAGGGTAAAACCACAAAAAATGCTGGATGGGATTTTAGCATTGGTGGCTCACATGGAACAGGTACAGTTCGAAGTATAGTTAAACCACCTCAATTTGGAGAAAAGAAACCTGAAGTTCCACTCTCTGGTGGAAACCTACGGTTTGCTGCCTATGGAAATGCACTTCGTGATGCCCCTGAAGGATTTTTTACAAAGGATGCTCGAGATTTATACCATGATAAACGTCGGGAAGATGAAGAGTTATCAGTAAGTGGATCTGGAACTGTTGTGATTCGATCTCCCCGAGGATCTCAGTCGACCGAATTCTTTAATCAAAGCAGTCTGTCAGGGAGCACTTATGCATTGTTGGAAGATACTTCATCTAGTGGAACTGTAGTTATTCGCGGGCAACATGATGATACAGATTCTCCCCGAACTCCAAAGTCCAGACTTGGCCTTCAGGATAGGACTTCCACAGCCTCATTTGAAGACAGTGAATTAAACCTTTCAGAGGCAAAGGCTGCAATTCAAGCAGGGTTAAAGAAATCAAATGCTAGAGAAAGGTCTGCGCTTGGAAAAATTAATAATGATGGGAAGGAGAATCGAAGAAGAGGGGAAATAACCAGTAGCGTTGATTCTTCCAGAGATTCTAATGAATACTTAGATGGGCCAAAAGCATTTTCAAGATCGCAACCAGCAACTGAGACTGAAGAAAGTGCAAAAGTATTATCATCTTCTTCACCGTTATCTATTTTGCTCATCCCATCTTTGAAGGAGATTTGTGTTGAGACCATATTCTCGGATGGGCTTGACATACCAATGAGCATTTCACAGGCTTCTGATTCGGTCAGTCTGAAAGAGATACCACATTATGAAATTAAAATTGGCGAAGAATGCGACTGGGTTAAGATAACTCAGGAATCATTTAATCCAATTGAAATAACCAAAGGACTTTGGATAGTTCCACAATGGAGAACTCCGCCGGACGTCGAAGCGACAAACATAATTCTTAATCCTGGACTAGCATTTGGAACCGGTGAGCACCCAACGACAAAGTTGTGCATATTATTGCTAAGCAGCCTCGTCAAAGGAGGGGAACGTTTCTTGGACTATGGCACGGGTTCTGGAGTTCTTTCAATTGCAGCTCTCAAGTTTGGTGCTGCCTCATCTGTTGGAATTGACATAGATCCACTAGCCATTGCATCTGCTAAGCACAATGCTGATTTGAACAATATAGGACCGGATCACATGAAATTACAACTGATTTCTGGAAAGGAAATCGTATGGAAATATGATTTGGTTGTCGCGAATATTCTTTTGAATCCTCTCCTAGATTTGGCAGATCATATTGTCTCCTTTGCCAAGCCTGGTGGAATTGTTGGTCTTTCTGGTATTCTCTCTGAGCAGGTTCCATGTATTATAGAGCGATACTCGCAGTACTTGGAGGACATATCTGTAACGGAGATGGATGATTGGGGATGTGTTAGTGGCAAAAAGAGAATAAATGTTGGGGGTGAAGAATGA 2478 41.69 MADAVMISEAVGSRFSSLELIGRGSFGDVYKGFDEELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSSYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMAIGCILRDLLHAVDYLHNEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLKHRFIRNARKSPRLLERIRERPKYQIKEDVETTRNGPRDMGELSDTVKAPRSLLREENAHISNQGKTTKNAGWDFSIGGSHGTGTVRSIVKPPQFGEKKPEVPLSGGNLRFAAYGNALRDAPEGFFTKDARDLYHDKRREDEELSVSGSGTVVIRSPRGSQSTEFFNQSSLSGSTYALLEDTSSSGTVVIRGQHDDTDSPRTPKSRLGLQDRTSTASFEDSELNLSEAKAAIQAGLKKSNARERSALGKINNDGKENRRRGEITSSVDSSRDSNEYLDGPKAFSRSQPATETEESAKVLSSSSPLSILLIPSLKEICVETIFSDGLDIPMSISQASDSVSLKEIPHYEIKIGEECDWVKITQESFNPIEITKGLWIVPQWRTPPDVEATNIILNPGLAFGTGEHPTTKLCILLLSSLVKGGERFLDYGTGSGVLSIAALKFGAASSVGIDIDPLAIASAKHNADLNNIGPDHMKLQLISGKEIVWKYDLVVANILLNPLLDLADHIVSFAKPGGIVGLSGILSEQVPCIIERYSQYLEDISVTEMDDWGCVSGKKRINVGGEE 825
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 3020751 3035016 - Bma010668.1 Bma14g00255 94236
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00255 825 SUPERFAMILY Protein kinase-like (PK-like) 12 306 IPR011009 -
Bma14g00255 825 Hamap Ribosomal protein L11 methyltransferase [prmA]. 522 817 IPR004498 GO:0006479|GO:0008276
Bma14g00255 825 Pfam Ribosomal protein L11 methyltransferase (PrmA) 576 817 - -
Bma14g00255 825 MobiDBLite consensus disorder prediction 402 428 - -
Bma14g00255 825 CDD STKc_MST3_like 13 287 - -
Bma14g00255 825 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bma14g00255 825 MobiDBLite consensus disorder prediction 292 311 - -
Bma14g00255 825 MobiDBLite consensus disorder prediction 449 483 - -
Bma14g00255 825 MobiDBLite consensus disorder prediction 411 428 - -
Bma14g00255 825 Gene3D Vaccinia Virus protein VP39 626 822 IPR029063 -
Bma14g00255 825 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00255 825 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00255 825 MobiDBLite consensus disorder prediction 504 528 - -
Bma14g00255 825 MobiDBLite consensus disorder prediction 465 483 - -
Bma14g00255 825 MobiDBLite consensus disorder prediction 503 559 - -
Bma14g00255 825 TIGRFAM prmA: ribosomal protein L11 methyltransferase 560 810 IPR004498 GO:0006479|GO:0008276
Bma14g00255 825 Gene3D Transferase(Phosphotransferase) domain 1 12 302 - -
Bma14g00255 825 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma14g00255 825 MobiDBLite consensus disorder prediction 346 367 - -
Bma14g00255 825 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 3 578 - -
Bma14g00255 825 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 578 - -
Bma14g00255 825 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 607 814 IPR029063 -
Bma14g00255 825 Coils Coil 41 68 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00127 Bma-Chr1:1244103 Bma14g00255 Bma-Chr14:3020751 2.25E-73 dispersed
Bma10g00841 Bma-Chr10:15014080 Bma14g00255 Bma-Chr14:3020751 5.67E-59 dispersed
Bma14g00255 Bma-Chr14:3020751 Bma15g00785 Bma-Chr15:16763102 1.93E-56 dispersed
Bma14g00255 Bma-Chr14:3020751 Bma12g00255 Bma-Chr12:3305310 2.76E-68 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66873 PF06325 PrmA 1.60E-73 CL0063 Bma PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00255 K08838 - vvi:100258981 862.062