Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma14g00257 | GAAAAAGTCGGGCTGGGAACATCTGATACGGACTCCGGAAAAGGAAAGAGCAAGATGTCGAAGAACATAACGCATGGATTTTATTTGGTCAAGGGAAAGTCACATCACGCCATGGAAGATTATGTCGTTGCTGAGTTTAAGCAAGTTGGTGAGAAAGAACTCGGTTTATTCGCAATTTTCGACGGCCATTTAAGTCACAACATTCCGAACTATTTACAGACGCATTTATTCGAGAATATCCTAAATGAGCCTGATTTTTGGACCAAACCAGCCAACGCAGTCAGGAAAGCGTATAGCGAAACAGATGCAATCATTCTGGACGAGGCAGTGGACTTAGGCAAAGGAGGATCTACTGCTGTTACGGCTATTCTGATCAATTGTCGTAAGCTGGTCGTAGCCAATGTTGGAGATTCTCGCGCAGTTATCTGTACAAATGGGGTGGCCACTCAATTATCAGTCGATCACGAGCCAAGTGTGGAAAAACATATGATCGAGAGTAGAGGTGGTTTCGTGTCGAACTTTCCAGGAGACGTAGCTCGAGTCGATGGGCAGCTTGCAGTGGCCAGAGCGTTTGGTGATAAAAGCTTGAAGAAACATCTGAGTTCCGACCCTCATGTGGTAGAGGTAATGGTCAAGGACGGGACCGAGTTCATTATATTGGCAAGTGATGGATTATGGAAGGTGATGTCGAACCAGGAGGCAGCAGACTCGATCAAGCATGTCAAGGATGCTCGAGCGGCAGCCAAGCAATTGACGGATGAGGCTCTGAAAAGGAAGAGCACGGATGATATTTCATGTATAGTTGTGAGATTTCAGTGA | 819 | 46.03 | EKVGLGTSDTDSGKGKSKMSKNITHGFYLVKGKSHHAMEDYVVAEFKQVGEKELGLFAIFDGHLSHNIPNYLQTHLFENILNEPDFWTKPANAVRKAYSETDAIILDEAVDLGKGGSTAVTAILINCRKLVVANVGDSRAVICTNGVATQLSVDHEPSVEKHMIESRGGFVSNFPGDVARVDGQLAVARAFGDKSLKKHLSSDPHVVEVMVKDGTEFIILASDGLWKVMSNQEAADSIKHVKDARAAAKQLTDEALKRKSTDDISCIVVRFQ | 272 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 3049750 | 3051144 | + | Bma010670.1 | Bma14g00257 | 94238 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma14g00257 | 272 | SUPERFAMILY | PP2C-like | 20 | 271 | IPR036457 | - | |
| Bma14g00257 | 272 | Gene3D | - | 6 | 272 | IPR036457 | - | |
| Bma14g00257 | 272 | Pfam | Protein phosphatase 2C | 35 | 264 | IPR001932 | - | |
| Bma14g00257 | 272 | PANTHER | PROTEIN PHOSPHATASE 2C 39-RELATED | 1 | 272 | - | - | |
| Bma14g00257 | 272 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 272 | IPR015655 | GO:0004722|GO:0006470 | |
| Bma14g00257 | 272 | ProSiteProfiles | PPM-type phosphatase domain profile. | 24 | 271 | IPR001932 | - | |
| Bma14g00257 | 272 | SMART | PP2C_4 | 19 | 269 | IPR001932 | - | |
| Bma14g00257 | 272 | CDD | PP2Cc | 25 | 271 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma03g00744 | Bma-Chr3:6756175 | Bma14g00257 | Bma-Chr14:3049750 | 4.22E-135 | dispersed | |
| Bma12g00365 | Bma-Chr12:6487620 | Bma14g00257 | Bma-Chr14:3049750 | 1.60E-110 | dispersed | |
| Bma14g00227 | Bma-Chr14:2774605 | Bma14g00257 | Bma-Chr14:3049750 | 4.86E-169 | dispersed | |
| Bma14g00257 | Bma-Chr14:3049750 | Bma07g00627 | Bma-Chr7:9974271 | 4.06E-115 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma14g00257 | K17506 | - | zju:107432573 | 447.588 |