Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma14g00281 ATGGATAAAGACGAACTAGGCGATGAGGTTGAAGTTCATTATACTGGGACCTTGCTCGATGGGACTAAGTTCGTCTCAAGTCGCGATAGAGATTCCACCTTCGACTTCACTTTTGGGCAGGGTCAAGTCATCAAAGGATGGGACCCGGGAATCAAAACGATGAAGAAAAAAGAAAATCCTCTTTTTACGCTCCCACCTGATCTAGCTTGTGGATCCTCTGTATTCCCTCCAACTATTCCTCCAAATGCCACTCTTCAGTTTGTTGTTGAATTGCTGTCCTGGACTAGTGTAAAAGACATATGCAAGAATGGTGGGAGTTATGGTAGTGGGGGACATTCAGGGACTGGTTATGGTTCTAACTCTGGAGGTAAGTATACCATAAATTATGGCGGTAACAACTATGGAAATGGAGCCACCCTTGGAAACTCTGGCAGAAATCAATTCAGCTCAGGCATTGGTAGTGGAAACACAAACAGCTTGGACGGAAATGCCCAAGTTTGGAAAGGAGGGAGCAATCAAGGTGGAGAACGAACTTTAGAAGGGAAAATGGATTTCGAGAGTCCAACCATGCCTATCACGAGTTCATTTGAAATTTTAATTCGTAAGATTTTGAACTACAAATCGACAAGGGAAAAATCATATTACAAGCCTCTAGTAGAGGTTAAGAGCATCCCAGCAGCACTAATTATGGAGGTGACTGCCACTAAAGAGGGAACCTACATTGTTGGAGGGAGATTATCAAGAAGTATTCAATATTCTTCCGTAAAGGATGCTGTTGTGTTGGACCCAGGAGAACATGTTTTATATGCTGCCAATGGAGATGGGCAACTTTCTGGTATTTTTGGAGTATCTGTGAAGCTGTTGAAAGGTAAGATTATGACGACGATGATGTTGCCCTTTGATGGCCCGACGAAGCTAAAGACCAAACAGTATGTGTTCGAGGAAAAATATGTTGCGCTTGATTCTGCCACATGGGCGCAGCTAAAAGAGCTGAGTTCGAAACGTAGATTACTTGAGGAGTCCATTAATGAGACGAGCTCCATTACTGAGGCGATTGTTACAGAAATGTCAGGTGGTTTGTCTACTCATCGTCAACAGGTTCTTCAACAATTAGAACAATCTCTACCATTGTTGGAAACCTTTGTTCTTCAAGTCGATTTAGTTAGCAGCAATCGTAAGATAGTTCAATGGACGGTAAACTTGAAATTTCATTGGAGTAGCAGCCTTAGTTCATCACCCATCTTTAATCACGGCGAAAAGTTCTTCCAAATTGACAATGTCAAGTTTGAGCTTGGTATGGTCGTATTCCTTTATGGTGCAATACTTCGAGAGAGGGCATTTGAAGTTTTGTTAACGGATTTGGCCTTATCTGCAACACTATTCAGAAAAGCTGCTGGAGTATATCAATATCTTTCCAATGAGATTCTTCCTCCGTTACAGTCCATCTTGCCTGCAGAAAGACCAATTGAAGCTATTTCCTCTGTTTCAACTGTTATGAGCTACATTTGCTTGGCTGAGGCCCAGGCAGTTGCTACGAGAAGGGCTGAAGAAAAGGGGAGCACTATAGGTCTCTTGGCTAAACTGCACTTTGGTGTTGGTGAGTTACTTGATCAGGCTGCTTCTACTTTATCTGCAGCTACCAGAGATTACAAGGACGCTTCCTCACATTTTGTGGAATTTATGTTGTTTTTCAAAGCCCTGCACGAGTTAAAATGTCACAAATATCTTGCGCAAGAAATGAAAATAGACAGCCAAGTAGGGGCGGCCATTGGAGTCCTTAGATCTTCTTTGGTTCGGGTGAGAAGGAAAATTCCAGTGGAAGAAACGTGGAAATCGACTTTTGAGAAGGAAATTGACGATGCTGTGGAAATGCTGAGGAAGTATGAGCGAGAAAACGAGTTTGTCTGGCACGATAGAAGTCCATCCGGCGACGACATAATGCAAGTGACGTTGGGCAAAGAAGTTGGGCTTGTTTCTCATGACTACAATGACATTGGTCAACGCATGAGCACGGAAACGAGACAGAGGGTTGAAGACGCCGAGTGTCGAAGCGCATTTGATTCTATTGCTCTCCAAATTTTTATCCTTGAGGGCAAGAATATTTTAAGGGGGAGGATTTGTCATGGAAGGTCATGGAAGAGCCCTCCACGAGGAGAGCCCAAGCCCAACACAAAGAGCAAGCTGTCGACGTGTCTATTCAGTTCTATTCAGTTAGGAAGCGAAGCTGATATAACCAGCAGCTAG 2244 43.4 MDKDELGDEVEVHYTGTLLDGTKFVSSRDRDSTFDFTFGQGQVIKGWDPGIKTMKKKENPLFTLPPDLACGSSVFPPTIPPNATLQFVVELLSWTSVKDICKNGGSYGSGGHSGTGYGSNSGGKYTINYGGNNYGNGATLGNSGRNQFSSGIGSGNTNSLDGNAQVWKGGSNQGGERTLEGKMDFESPTMPITSSFEILIRKILNYKSTREKSYYKPLVEVKSIPAALIMEVTATKEGTYIVGGRLSRSIQYSSVKDAVVLDPGEHVLYAANGDGQLSGIFGVSVKLLKGKIMTTMMLPFDGPTKLKTKQYVFEEKYVALDSATWAQLKELSSKRRLLEESINETSSITEAIVTEMSGGLSTHRQQVLQQLEQSLPLLETFVLQVDLVSSNRKIVQWTVNLKFHWSSSLSSSPIFNHGEKFFQIDNVKFELGMVVFLYGAILRERAFEVLLTDLALSATLFRKAAGVYQYLSNEILPPLQSILPAERPIEAISSVSTVMSYICLAEAQAVATRRAEEKGSTIGLLAKLHFGVGELLDQAASTLSAATRDYKDASSHFVEFMLFFKALHELKCHKYLAQEMKIDSQVGAAIGVLRSSLVRVRRKIPVEETWKSTFEKEIDDAVEMLRKYERENEFVWHDRSPSGDDIMQVTLGKEVGLVSHDYNDIGQRMSTETRQRVEDAECRSAFDSIALQIFILEGKNILRGRICHGRSWKSPPRGEPKPNTKSKLSTCLFSSIQLGSEADITSS 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3545111 3547354 + Bma010694.1 Bma14g00281 94262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma14g00281 747 ProSiteProfiles BRO1 domain profile. 403 672 IPR004328 -
Bma14g00281 747 SUPERFAMILY FKBP-like 5 101 - -
Bma14g00281 747 CDD BRO1_Alix_like_2 305 646 - -
Bma14g00281 747 PANTHER BRO1 DOMAIN-CONTAINING PROTEIN BROX 293 649 - -
Bma14g00281 747 Coils Coil 611 631 - -
Bma14g00281 747 Gene3D alix/aip1 like domains 302 660 IPR038499 -
Bma14g00281 747 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 7 95 IPR001179 GO:0003755
Bma14g00281 747 Pfam BRO1-like domain 342 649 IPR004328 -
Bma14g00281 747 SMART BRO1_2 322 679 IPR004328 -
Bma14g00281 747 Gene3D - 2 103 IPR046357 GO:0003755
Bma14g00281 747 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 6 92 IPR001179 GO:0003755
Bma14g00281 747 PANTHER PCD6 INTERACTING PROTEIN-RELATED 293 649 IPR045251 GO:0071985
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00159 Bma-Chr1:1505858 Bma14g00281 Bma-Chr14:3545111 0 dispersed
Bma12g00350 Bma-Chr12:5877918 Bma14g00281 Bma-Chr14:3545111 7.43E-11 dispersed
Bma14g00281 Bma-Chr14:3545111 Bma15g00747 Bma-Chr15:14930209 7.82E-20 dispersed
Bma14g00281 Bma-Chr14:3545111 Bma15g00650 Bma-Chr15:9407932 2.69E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma14g00281 - - jre:108993285 407.142